Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is spoIIIAD [H]

Identifier: 170756713

GI number: 170756713

Start: 2019053

End: 2019436

Strand: Reverse

Name: spoIIIAD [H]

Synonym: CLD_2745

Alternate gene names: 170756713

Gene position: 2019436-2019053 (Counterclockwise)

Preceding gene: 170755925

Following gene: 170755569

Centisome position: 51.02

GC content: 28.65

Gene sequence:

>384_bases
ATGGAAATCATTAAAATAGTAGCCTTTGCATTTATTTCACTATTTCTAATACTAATATTTAAAGGGAGAAGAGATGATTT
AGCAGTTCAGATAAGTATTGCAGCAGGAGTGATAATATTTTTATTCTTGACATCTAAAATAACAGCTATACTTCAATTTA
TGCAACAACTAGCTTCAAAAACTAATATAGATTTTATATATTTGACTACAGTTTTTAAAATATTAGGAATAGCTTATTTA
GCTACTTTTTGTAGTGAAATATGCAAGGACGCAGGAGAAAATAGCTTAGCATCAAAAGTAGAATTTGCTGGTAAGATACT
AATACTTGGACTTGCCATACCTATACTTATGGCAGTGCTTCAATCTATTTTAAAGATTATGTAG

Upstream 100 bases:

>100_bases
TTGTAATACTTATGATGGTAATAAATCTAATAAATAAATTATTTAATGCGGTAAAAACCATGTTCCAAATTTAAAATATG
CTAAGGCTTAGGAGGGAAAA

Downstream 100 bases:

>100_bases
GTGAGAAAATGAAAAAAAGTTTAATGACTATTTTATTAACGTTTTTATTTGTGATCATTTTATGTTTCAATGTACAAGCC
GCACCTAGCCAGCATAATGA

Product: stage III sporulation protein AD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLTTVFKILGIAYL
ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM

Sequences:

>Translated_127_residues
MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLTTVFKILGIAYL
ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM
>Mature_127_residues
MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASKTNIDFIYLTTVFKILGIAYL
ATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVLQSILKIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014211 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13978; Mature: 13978

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASK
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNIDFIYLTTVFKILGIAYLATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSILKIM
HHHHHHC
>Mature Secondary Structure
MEIIKIVAFAFISLFLILIFKGRRDDLAVQISIAAGVIIFLFLTSKITAILQFMQQLASK
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNIDFIYLTTVFKILGIAYLATFCSEICKDAGENSLASKVEFAGKILILGLAIPILMAVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSILKIM
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]