| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756700
Identifier: 170756700
GI number: 170756700
Start: 2468190
End: 2468357
Strand: Reverse
Name: 170756700
Synonym: CLD_2300
Alternate gene names: NA
Gene position: 2468357-2468190 (Counterclockwise)
Preceding gene: 170754515
Following gene: 170757111
Centisome position: 62.36
GC content: 28.57
Gene sequence:
>168_bases ATGTCAAAAGAGCAGTTATTATTAGAGAAAATAGAAGAAGCTAGAACTTTAATGAACCAGCTAATAAGTGAAAAATCTCA GCTCATTGATGAGGAACTTGTACTATTAAGTCAAAAGTTAGATGATTTGCTTAATGAGTACAACAAATTTTTAAGACAGA ATCATTAA
Upstream 100 bases:
>100_bases ATTCTTTGACGAATTGTAGTACAAGCACCCTTTAAGATAGAGAAATTATTACATAGCATCCTTTCAATTTTATATAGTTG AAATTGAAAGGAGGGATACT
Downstream 100 bases:
>100_bases GTATTAGCATACTAAAGAAGAAAAGTATTAGATTTCTTAATGCTTAAGTTATTCAAAGGACCCCAGGTAGAAATGCCTGG GGTTTTTCTAAAGTTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MSKEQLLLEKIEEARTLMNQLISEKSQLIDEELVLLSQKLDDLLNEYNKFLRQNH
Sequences:
>Translated_55_residues MSKEQLLLEKIEEARTLMNQLISEKSQLIDEELVLLSQKLDDLLNEYNKFLRQNH >Mature_54_residues SKEQLLLEKIEEARTLMNQLISEKSQLIDEELVLLSQKLDDLLNEYNKFLRQNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6587; Mature: 6456
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEQLLLEKIEEARTLMNQLISEKSQLIDEELVLLSQKLDDLLNEYNKFLRQNH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKEQLLLEKIEEARTLMNQLISEKSQLIDEELVLLSQKLDDLLNEYNKFLRQNH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA