| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754515
Identifier: 170754515
GI number: 170754515
Start: 2468658
End: 2469065
Strand: Reverse
Name: 170754515
Synonym: CLD_2299
Alternate gene names: NA
Gene position: 2469065-2468658 (Counterclockwise)
Preceding gene: 170757674
Following gene: 170756700
Centisome position: 62.38
GC content: 26.96
Gene sequence:
>408_bases ATGCAAATAATTACAGATGCGGTTGTAAATATTCTAGGAGTAGTTATTATATATTTAAGTACAGTAGTAGTACAATATTT TAAGAAAAAGAGACAAGCTTTAATAAATCAAATGAGTAATGAACAATACAACATGCACTACAATATTACTAAAAGTATAT TTTATGCAGTAGAACAGGAATATAGGCTTATACCAAAAAGTGGTGAACAAAAAGCAGAAAAATTCAATAAAATGATTATG GAAAAAATACCAAGCTTAAAACAAGAAGATTTAGATCATTTTAGAGAGGCTATCGTTGGAGAAATAAACACTCAAATAAA GCAATCAAAATTACTTGAACCAGCAGATTTAATAACTAATGAAGAAAAGCAATTGCCCGATTCTAAGGAAAATAAAATAG AAAATTAG
Upstream 100 bases:
>100_bases AAAAGTTCCAATCTAAATAAAGTAATTAAGAAGCACATACTAAGTAATAATAGTATGTGCTTCTATTGTATAGTCAAATA AAATTATAAATAATCAAATA
Downstream 100 bases:
>100_bases AAAATAGATAGCTCCCTTTAAGAAGCTATCTTAGGCTGTTGATAAATATATTTTGTCAACAGCTTTTTATTTTTGCTTAT TTTGTTGCGAACCTACTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQIITDAVVNILGVVIIYLSTVVVQYFKKKRQALINQMSNEQYNMHYNITKSIFYAVEQEYRLIPKSGEQKAEKFNKMIM EKIPSLKQEDLDHFREAIVGEINTQIKQSKLLEPADLITNEEKQLPDSKENKIEN
Sequences:
>Translated_135_residues MQIITDAVVNILGVVIIYLSTVVVQYFKKKRQALINQMSNEQYNMHYNITKSIFYAVEQEYRLIPKSGEQKAEKFNKMIM EKIPSLKQEDLDHFREAIVGEINTQIKQSKLLEPADLITNEEKQLPDSKENKIEN >Mature_135_residues MQIITDAVVNILGVVIIYLSTVVVQYFKKKRQALINQMSNEQYNMHYNITKSIFYAVEQEYRLIPKSGEQKAEKFNKMIM EKIPSLKQEDLDHFREAIVGEINTQIKQSKLLEPADLITNEEKQLPDSKENKIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15776; Mature: 15776
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIITDAVVNILGVVIIYLSTVVVQYFKKKRQALINQMSNEQYNMHYNITKSIFYAVEQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YRLIPKSGEQKAEKFNKMIMEKIPSLKQEDLDHFREAIVGEINTQIKQSKLLEPADLITN HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC EEKQLPDSKENKIEN CHHHCCCCCCCCCCC >Mature Secondary Structure MQIITDAVVNILGVVIIYLSTVVVQYFKKKRQALINQMSNEQYNMHYNITKSIFYAVEQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YRLIPKSGEQKAEKFNKMIMEKIPSLKQEDLDHFREAIVGEINTQIKQSKLLEPADLITN HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC EEKQLPDSKENKIEN CHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA