Click here to switch to the map view.

The map label for this gene is ygaY [H]

Identifier: 170756694

GI number: 170756694

Start: 3887450

End: 3888667

Strand: Reverse

Name: ygaY [H]

Synonym: CLD_0913

Alternate gene names: 170756694

Gene position: 3888667-3887450 (Counterclockwise)

Preceding gene: 170756434

Following gene: 170755585

Centisome position: 98.24

GC content: 32.76

Gene sequence:

>1218_bases
GTGTATCAATCAAATAACAAGTTTATAAAAACAAATTCATCAATAAATAATCTTGAAGCTAAACCCATATTGACTAATTT
ATTAATTTTAGTTATGTCTATAGCTTGTGGACTTACTGTAGCAAATTTATATTATATCCAACCCCTCTTAGCCGATATAG
CAAAAACCTTTCATGTCAGCCAATTAAGCATAGGCTTTGCAGCTATGCTTACACAAATAGGTTATGCAATTGGAATGATA
TTTATATTGCCTTTGGGAGATATAAAAGAAAAGAGAAAATTAATAGTAATAATGCTTTTATGCTCAATAATCTCACTTAT
GAGTATGTTCTTCGCTTCAAATATATATATTCTTACAATTTCTTCCTTCGCTGTTGGATTTACTTCTATTATTCCTCAAC
TTATTATCCCTTTAGCAGCACAATTATCAACTCCACAGCAAAGAGGGCAAACTATTGGTACAATAATGAGCGGCTTGTTA
ATCGGAATATTACTTTCTCGTACAATCAGCGGCATCTTAGGCGGCTACTTTGGCTGGAGAACAGTTTATCTTATTGCAGC
GATTATGATGCTTACTCTCATGCTTATCCTTAGGAAGTTGATACCCTTATGCGAACCTATCTCTGACATTAAATATACTC
AACTGTTAAAATCAATGATATACTTAATAAAAACTGAACCAATTTTAAGAGAAGTCTCTATTAATGGTGCTTTAATGTTC
TCAGCTTTTAGTGCCTTTTGGACATCCCTCATATTTTTACTTGAAAGTTCTCATTACAATATGGGAGCTGAAGCAGCAGG
TTTATTTGGATTAGTTGGTATTATTGGTGCTCTTGCTGCTCCAATAGTTGGAAAATTAGCTGACAAAAGGGGCTCAAGAT
TTGCTATAGGTATATGTATAATCGTAGTTATAATTGCTTATTTATTTTTCTTTCTATTTGGCTTTAAAATTTGGGGACTT
ATTTTAGGAATCATTTTTCTAGATTTAGGAGTGCAATCCTGTAATGTTTCTAATCAAGCAAGAGTACATTCCTTAAACGA
AAAAACACGTAATAGACTTAATACTATTTATATGGTCAGCTTTTTTCTCGGAGGAGCATTAGGTTCCTTCTTAGGTTCCT
ATAGTTATTCTCATTTTGGATGGTATGGAGTTTGCACTTTTGGAATGGCAACTCAAATCATAGCAATTATTCTATACAAG
GTTGGGGAAAAAGCATAA

Upstream 100 bases:

>100_bases
ATGAAAAAGGAGCTATCAAAAATCCAGAAAGAGAAGAAAAGATTTTTACTAATTTTATTCGATGAAATATATTATTATAA
TCTAAGGAGGTGATTTATAA

Downstream 100 bases:

>100_bases
AATATATTAATTTTAGAAAAAAATGGTTCTGAAGGAGTTTCGCCCAAAAACTGTATTGTCTGTGGTCATTGTGTAGCTAT
CTGCCCAAGAGAAGCTATTG

Product: major facilitator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MYQSNNKFIKTNSSINNLEAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIIPLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTISGILGGYFGWRTVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIYLIKTEPILREVSINGALMF
SAFSAFWTSLIFLLESSHYNMGAEAAGLFGLVGIIGALAAPIVGKLADKRGSRFAIGICIIVVIIAYLFFFLFGFKIWGL
ILGIIFLDLGVQSCNVSNQARVHSLNEKTRNRLNTIYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILYK
VGEKA

Sequences:

>Translated_405_residues
MYQSNNKFIKTNSSINNLEAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIIPLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTISGILGGYFGWRTVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIYLIKTEPILREVSINGALMF
SAFSAFWTSLIFLLESSHYNMGAEAAGLFGLVGIIGALAAPIVGKLADKRGSRFAIGICIIVVIIAYLFFFLFGFKIWGL
ILGIIFLDLGVQSCNVSNQARVHSLNEKTRNRLNTIYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILYK
VGEKA
>Mature_405_residues
MYQSNNKFIKTNSSINNLEAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVSQLSIGFAAMLTQIGYAIGMI
FILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTISSFAVGFTSIIPQLIIPLAAQLSTPQQRGQTIGTIMSGLL
IGILLSRTISGILGGYFGWRTVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIYLIKTEPILREVSINGALMF
SAFSAFWTSLIFLLESSHYNMGAEAAGLFGLVGIIGALAAPIVGKLADKRGSRFAIGICIIVVIIAYLFFFLFGFKIWGL
ILGIIFLDLGVQSCNVSNQARVHSLNEKTRNRLNTIYMVSFFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILYK
VGEKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=363, Percent_Identity=22.8650137741047, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44445; Mature: 44445

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQSNNKFIKTNSSINNLEAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVS
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSIGFAAMLTQIGYAIGMIFILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
SSFAVGFTSIIPQLIIPLAAQLSTPQQRGQTIGTIMSGLLIGILLSRTISGILGGYFGWR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIYLIKTEPILREVSINGALMF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
SAFSAFWTSLIFLLESSHYNMGAEAAGLFGLVGIIGALAAPIVGKLADKRGSRFAIGICI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IVVIIAYLFFFLFGFKIWGLILGIIFLDLGVQSCNVSNQARVHSLNEKTRNRLNTIYMVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILYKVGEKA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQSNNKFIKTNSSINNLEAKPILTNLLILVMSIACGLTVANLYYIQPLLADIAKTFHVS
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLSIGFAAMLTQIGYAIGMIFILPLGDIKEKRKLIVIMLLCSIISLMSMFFASNIYILTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
SSFAVGFTSIIPQLIIPLAAQLSTPQQRGQTIGTIMSGLLIGILLSRTISGILGGYFGWR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVYLIAAIMMLTLMLILRKLIPLCEPISDIKYTQLLKSMIYLIKTEPILREVSINGALMF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
SAFSAFWTSLIFLLESSHYNMGAEAAGLFGLVGIIGALAAPIVGKLADKRGSRFAIGICI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IVVIIAYLFFFLFGFKIWGLILGIIFLDLGVQSCNVSNQARVHSLNEKTRNRLNTIYMVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFLGGALGSFLGSYSYSHFGWYGVCTFGMATQIIAIILYKVGEKA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]