| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755585
Identifier: 170755585
GI number: 170755585
Start: 3882098
End: 3882646
Strand: Reverse
Name: 170755585
Synonym: CLD_0919
Alternate gene names: NA
Gene position: 3882646-3882098 (Counterclockwise)
Preceding gene: 170756694
Following gene: 170755805
Centisome position: 98.09
GC content: 25.87
Gene sequence:
>549_bases ATGAAGTGTTATTTAGTGGCGTTGTTTGATAAAGAAGATTACTATAAAATAGAAAAAATACAGAGGGATATATCTAAAAA GTATAAAATATATAGAAATTTACCTATGTTACATATAACTCTTGAGGTAGTAGAGGATCCTAATATTAATAAATTAGAAG AAGTAATAGAAAAGATAATAAAACCATATAAAAAATTTAAGGTAGAAATAAATGGAGCTATTTGTTTTGATCCACCTTAT AAATCAGTTAATTTAAAAATAGAAAACAAAGGCTATATAATGAGGCTAGCAAGGATAATTAATGATACTTTAAAATTACA TGGTTTTAAAGTAAGAGAAAATATAGAAAATTGGGATTTACATGTGTCTTTAGCAAATACTAATTTTGCATCTAGAGAAT GGTCAGCTAGAGAGTATATATCTGCTTGTAGCAATTTAAAGGGAGCAGGTATGCATGAAATGGCTAAAATCGATAGGATA GAAATTTGGAAGCCTATAAATAATAAAAAGGAAATGGTAATAAAGTCTTTTCCATTAAAAGAATTTTAA
Upstream 100 bases:
>100_bases TATGATTTTTATTAAATTGTTATAATTTATTGACATTTTAAAACATAATATATTATGGTATAATACTATAAAATAGATAT ACGGGGGATTAAAGTTAATC
Downstream 100 bases:
>100_bases TATTATAAGATAAAAGCACACCTGATACTAGGTGTGCTTTTATTTTATATATCTAAAAGATTTTTTTTGTAATCGGAATA AAGTTTTCTAAGTAATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI EIWKPINNKKEMVIKSFPLKEF
Sequences:
>Translated_182_residues MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI EIWKPINNKKEMVIKSFPLKEF >Mature_182_residues MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI EIWKPINNKKEMVIKSFPLKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21587; Mature: 21587
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKII CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH KPYKKFKVEINGAICFDPPYKSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDL HHHHHEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEE HVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRIEIWKPINNKKEMVIKSFPLK EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHEEEECCCCC EF CC >Mature Secondary Structure MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKII CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH KPYKKFKVEINGAICFDPPYKSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDL HHHHHEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEE HVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRIEIWKPINNKKEMVIKSFPLK EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHEEEECCCCC EF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA