Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755585

Identifier: 170755585

GI number: 170755585

Start: 3882098

End: 3882646

Strand: Reverse

Name: 170755585

Synonym: CLD_0919

Alternate gene names: NA

Gene position: 3882646-3882098 (Counterclockwise)

Preceding gene: 170756694

Following gene: 170755805

Centisome position: 98.09

GC content: 25.87

Gene sequence:

>549_bases
ATGAAGTGTTATTTAGTGGCGTTGTTTGATAAAGAAGATTACTATAAAATAGAAAAAATACAGAGGGATATATCTAAAAA
GTATAAAATATATAGAAATTTACCTATGTTACATATAACTCTTGAGGTAGTAGAGGATCCTAATATTAATAAATTAGAAG
AAGTAATAGAAAAGATAATAAAACCATATAAAAAATTTAAGGTAGAAATAAATGGAGCTATTTGTTTTGATCCACCTTAT
AAATCAGTTAATTTAAAAATAGAAAACAAAGGCTATATAATGAGGCTAGCAAGGATAATTAATGATACTTTAAAATTACA
TGGTTTTAAAGTAAGAGAAAATATAGAAAATTGGGATTTACATGTGTCTTTAGCAAATACTAATTTTGCATCTAGAGAAT
GGTCAGCTAGAGAGTATATATCTGCTTGTAGCAATTTAAAGGGAGCAGGTATGCATGAAATGGCTAAAATCGATAGGATA
GAAATTTGGAAGCCTATAAATAATAAAAAGGAAATGGTAATAAAGTCTTTTCCATTAAAAGAATTTTAA

Upstream 100 bases:

>100_bases
TATGATTTTTATTAAATTGTTATAATTTATTGACATTTTAAAACATAATATATTATGGTATAATACTATAAAATAGATAT
ACGGGGGATTAAAGTTAATC

Downstream 100 bases:

>100_bases
TATTATAAGATAAAAGCACACCTGATACTAGGTGTGCTTTTATTTTATATATCTAAAAGATTTTTTTTGTAATCGGAATA
AAGTTTTCTAAGTAATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY
KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI
EIWKPINNKKEMVIKSFPLKEF

Sequences:

>Translated_182_residues
MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY
KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI
EIWKPINNKKEMVIKSFPLKEF
>Mature_182_residues
MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKIIKPYKKFKVEINGAICFDPPY
KSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDLHVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRI
EIWKPINNKKEMVIKSFPLKEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21587; Mature: 21587

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKII
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH
KPYKKFKVEINGAICFDPPYKSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDL
HHHHHEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEE
HVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRIEIWKPINNKKEMVIKSFPLK
EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHEEEECCCCC
EF
CC
>Mature Secondary Structure
MKCYLVALFDKEDYYKIEKIQRDISKKYKIYRNLPMLHITLEVVEDPNINKLEEVIEKII
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH
KPYKKFKVEINGAICFDPPYKSVNLKIENKGYIMRLARIINDTLKLHGFKVRENIENWDL
HHHHHEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEE
HVSLANTNFASREWSAREYISACSNLKGAGMHEMAKIDRIEIWKPINNKKEMVIKSFPLK
EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHEEEECCCCC
EF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA