| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756635
Identifier: 170756635
GI number: 170756635
Start: 1016058
End: 1016855
Strand: Direct
Name: 170756635
Synonym: CLD_3659
Alternate gene names: NA
Gene position: 1016058-1016855 (Clockwise)
Preceding gene: 170757546
Following gene: 170757465
Centisome position: 25.67
GC content: 28.2
Gene sequence:
>798_bases ATGCTTATAAATAAGGAAGTGAAAAAAATGAGATTAAATAATTATATGAAAAATTATGCAGATCTGCTATTAAAATCAAA TAGAAGTTTCTATTCTTCAGGACATAATAATTTAAATAATAGAAGGAATTCAAATATATATGCTGAAACTTCTGATTATA TAAACAATGACATAGATTTTGATAGATCAAAAGAGTTTTTATCTAATAGAGAATTACTTTCAAGATTAAAAAGTATTAAT GGAAAAGAAATTAAACCAGTAAAGGCTGTTGATAATGTTTTGAACTTTGAAAAGGGAGTATATAATAAAATGAAAACAAA GTCAGGAGTAACAGCTATATTTACTGCTGGGGATGCTGGTAATGTATATATGCCCTATGATGATATTAAAGACAATTTTT CTTTATCTCCTTCAGATTCTGAAGAAGTAGCTAGAGCAGGAAGGTTATTCACATATCTTGCAAGGGATAAAACAGGATAT TTTGCACAGTCTTCATTTAGTCAAGCGGAAATAAAAGAAACCTTAGGAAGTGTAGGTATTAAGCCAGGATGGTTTGAAGT TAAAAGTGGAAATTATTCAAATAAATTTTATATGTTTGATGATGGAATAATTTTAGGAGAATATGATGTTGAAGCTAAAA GAAATGGAATGAATGAACATGATTGGTTTGGAGATGGATATACTAAAGATTCTAAATTTATTTTGCATGGTAAAGAATAT AAATTAGATGATGAGGGGCATTTGAATATACCAAAAGGAGAAGGCTGCCTTATGAGAGATCTCATAAGAATTAAATAG
Upstream 100 bases:
>100_bases TACATTTAAGTATGTATATCCTATATTACCTAAATAAACATTAAAAATTTTTAAGATAGTTAAAAAGTATAACTAAGCTT TTTAACAATAAGTAAGAAAA
Downstream 100 bases:
>100_bases AAGTCCACTAAATATGTAAAAGATATTAATACAATTTGTTTTATATATGCAATTTCAGATAGAACTTATCATATATCAGT ATTTTAAAAAATTTATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDYINNDIDFDRSKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGVTAIFTAGDAGNVYMPYDDIKDNFSLSPSDSEEVARAGRLFTYLARDKTGY FAQSSFSQAEIKETLGSVGIKPGWFEVKSGNYSNKFYMFDDGIILGEYDVEAKRNGMNEHDWFGDGYTKDSKFILHGKEY KLDDEGHLNIPKGEGCLMRDLIRIK
Sequences:
>Translated_265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDYINNDIDFDRSKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGVTAIFTAGDAGNVYMPYDDIKDNFSLSPSDSEEVARAGRLFTYLARDKTGY FAQSSFSQAEIKETLGSVGIKPGWFEVKSGNYSNKFYMFDDGIILGEYDVEAKRNGMNEHDWFGDGYTKDSKFILHGKEY KLDDEGHLNIPKGEGCLMRDLIRIK >Mature_265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDYINNDIDFDRSKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGVTAIFTAGDAGNVYMPYDDIKDNFSLSPSDSEEVARAGRLFTYLARDKTGY FAQSSFSQAEIKETLGSVGIKPGWFEVKSGNYSNKFYMFDDGIILGEYDVEAKRNGMNEHDWFGDGYTKDSKFILHGKEY KLDDEGHLNIPKGEGCLMRDLIRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30350; Mature: 30350
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINKEVKKMRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDYINNDIDF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECHHHCCCCCCC DRSKEFLSNRELLSRLKSINGKEIKPVKAVDNVLNFEKGVYNKMKTKSGVTAIFTAGDAG CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC NVYMPYDDIKDNFSLSPSDSEEVARAGRLFTYLARDKTGYFAQSSFSQAEIKETLGSVGI CEEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCC KPGWFEVKSGNYSNKFYMFDDGIILGEYDVEAKRNGMNEHDWFGDGYTKDSKFILHGKEY CCCEEEEECCCCCCEEEEEECCEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCC KLDDEGHLNIPKGEGCLMRDLIRIK CCCCCCCEECCCCCCHHHHHHHHCC >Mature Secondary Structure MLINKEVKKMRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDYINNDIDF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECHHHCCCCCCC DRSKEFLSNRELLSRLKSINGKEIKPVKAVDNVLNFEKGVYNKMKTKSGVTAIFTAGDAG CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC NVYMPYDDIKDNFSLSPSDSEEVARAGRLFTYLARDKTGYFAQSSFSQAEIKETLGSVGI CEEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCC KPGWFEVKSGNYSNKFYMFDDGIILGEYDVEAKRNGMNEHDWFGDGYTKDSKFILHGKEY CCCEEEEECCCCCCEEEEEECCEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCC KLDDEGHLNIPKGEGCLMRDLIRIK CCCCCCCEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA