| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757465
Identifier: 170757465
GI number: 170757465
Start: 1017294
End: 1018091
Strand: Direct
Name: 170757465
Synonym: CLD_3658
Alternate gene names: NA
Gene position: 1017294-1018091 (Clockwise)
Preceding gene: 170756635
Following gene: 170755529
Centisome position: 25.7
GC content: 29.95
Gene sequence:
>798_bases ATGCTTATAAATAAGGAAGTGAAAAAAATGAGATTAAATAATTATATGAAAAATTATGCAGACTTGTTATTAAAATCAAA TAGAAGTTTATATTCTTCAGGATATAATAATTTAAATAATACAAGAAATTCAAATATATATGGGGAAACTTCTGGGTTTA TAAAGAATGACATAGATTTTGATAGAGCAAAAGAGTTTTTATCCAATAGAGAATTACTTTCAAGATTAAAAAGTATTAAT GGAAAAGAAATTAAACCAGTAAAGGCTGTGGATAATGTTTTGAACTTTGAAAAAGGAGTATATAATAAAATGAAGACAAA GTCAGGAATAACAGCTATATTTACTGCTGGAGATGGGGGCAATGTATATATGCCCTATGATGATATTAAAGATAATTTTT CTTTATGTCCTTCAGATTCTGGGGAAGTAGCTAGAGCAGGAAGATTATTTACATATCTTGCAAGCGATAAGACCGGATAT TGTGCTCAGTCTTCATTTAGTAAAGAGGAGATAAAAGAAACTTTGGAGAGTGTTGGTATTAAACCAGGATGGTTTGAAGT TAAAAGTGGAAACTATTCAAATAAATTCTATATGTCTGATGATGGAATCATATCAGGTGAGTATGATATCGAAGCCACAA GAAATGGAATCAATGATCGTGATTGGTTTGGAGATGGATATACTAAAGATTCTAAATTTATTTTAGATGGTAAGGAGTAT AAATTGGATGATGAAGGCCACTTGCATATACCGAAAGGTGAGGTGTGTATCATGGAAAGACTAACAAGAATTAAATAG
Upstream 100 bases:
>100_bases TTCATTTGAAAATATATATCCCGTATTACCTAATTAAACATTAAAAATTTTTAAGATAGTTAAAAAGTATAACTAAGCTT TTTAACAATAAGTAAGAAAA
Downstream 100 bases:
>100_bases AAGTCCACTGGAAATGTAAAAAATATTAATATAATTTGTTTTTTGTTTAGTTATCATGATTTGTTTTAGACATGCTATTT CAGATAGAACTTATTATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSLYSSGYNNLNNTRNSNIYGETSGFIKNDIDFDRAKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAIFTAGDGGNVYMPYDDIKDNFSLCPSDSGEVARAGRLFTYLASDKTGY CAQSSFSKEEIKETLESVGIKPGWFEVKSGNYSNKFYMSDDGIISGEYDIEATRNGINDRDWFGDGYTKDSKFILDGKEY KLDDEGHLHIPKGEVCIMERLTRIK
Sequences:
>Translated_265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSLYSSGYNNLNNTRNSNIYGETSGFIKNDIDFDRAKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAIFTAGDGGNVYMPYDDIKDNFSLCPSDSGEVARAGRLFTYLASDKTGY CAQSSFSKEEIKETLESVGIKPGWFEVKSGNYSNKFYMSDDGIISGEYDIEATRNGINDRDWFGDGYTKDSKFILDGKEY KLDDEGHLHIPKGEVCIMERLTRIK >Mature_265_residues MLINKEVKKMRLNNYMKNYADLLLKSNRSLYSSGYNNLNNTRNSNIYGETSGFIKNDIDFDRAKEFLSNRELLSRLKSIN GKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAIFTAGDGGNVYMPYDDIKDNFSLCPSDSGEVARAGRLFTYLASDKTGY CAQSSFSKEEIKETLESVGIKPGWFEVKSGNYSNKFYMSDDGIISGEYDIEATRNGINDRDWFGDGYTKDSKFILDGKEY KLDDEGHLHIPKGEVCIMERLTRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30091; Mature: 30091
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINKEVKKMRLNNYMKNYADLLLKSNRSLYSSGYNNLNNTRNSNIYGETSGFIKNDIDF CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH DRAKEFLSNRELLSRLKSINGKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAIFTAGDGG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC NVYMPYDDIKDNFSLCPSDSGEVARAGRLFTYLASDKTGYCAQSSFSKEEIKETLESVGI CEEECHHCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC KPGWFEVKSGNYSNKFYMSDDGIISGEYDIEATRNGINDRDWFGDGYTKDSKFILDGKEY CCCEEEEECCCCCCEEEECCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCE KLDDEGHLHIPKGEVCIMERLTRIK EECCCCCEECCCCCHHHHHHHHHCC >Mature Secondary Structure MLINKEVKKMRLNNYMKNYADLLLKSNRSLYSSGYNNLNNTRNSNIYGETSGFIKNDIDF CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH DRAKEFLSNRELLSRLKSINGKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAIFTAGDGG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC NVYMPYDDIKDNFSLCPSDSGEVARAGRLFTYLASDKTGYCAQSSFSKEEIKETLESVGI CEEECHHCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC KPGWFEVKSGNYSNKFYMSDDGIISGEYDIEATRNGINDRDWFGDGYTKDSKFILDGKEY CCCEEEEECCCCCCEEEECCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCE KLDDEGHLHIPKGEVCIMERLTRIK EECCCCCEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA