| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756629
Identifier: 170756629
GI number: 170756629
Start: 1134890
End: 1135378
Strand: Direct
Name: 170756629
Synonym: CLD_3543
Alternate gene names: NA
Gene position: 1134890-1135378 (Clockwise)
Preceding gene: 170757547
Following gene: 170754587
Centisome position: 28.67
GC content: 26.79
Gene sequence:
>489_bases ATGAAAACACTTATTGTTTATGGAACTAAACATGGCACTACGGAAAAATGTAGTAAGCTTTTAAAGGATAAGCTTTCAGG AGAAGTTGTAATTATAAATATAAAGAAGGAAAATATGCCAGATATAACTACATTTAATAACATAATTATTGGTGGATCAA TTTATATGGGACAGATTCAAAAGGAAGTAAAAAATTTTTCTATAGAAAATATTAATGTATTAAAAGAAAAAAGAGTTGGG ATTTTTATATGTGGACTCAATGAGAAAGATATAGAAGCACAGTTAAACAATGCCTTCCCAAAAGAATTACTAACTAATGC CGTTGCAAAAGAATGTTTTGGCGGTGAATGTATACTTAAGAATATGAATTTCTTTGAAAGATTTATAATGAAGAAGGTTA GTAAGATCGATAAGGATACATCAAAAATTTCAGAAGAAAATATTAATAAGTTCACTCAGTCAATAAATGATAATTATAGC AATAAGTAA
Upstream 100 bases:
>100_bases ATTAGAAAAAAATATATCAAAGCAGCAAAGGGAAAGACTTATAGATCATCATTTTCAGATTCTTATAAGTGGATTGTTAA AATAAAGGGGAGAATAAAAA
Downstream 100 bases:
>100_bases GTATATTTTAAATATTCAGTTGATAATGTTAATAAAAATAATATAAAGATAGGGCTGTTTCAAAATAGCTTTAATCGTAT TTTGAAACAGCACCATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Flavodoxin; Flavodoxin Domain-Containing Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKTLIVYGTKHGTTEKCSKLLKDKLSGEVVIINIKKENMPDITTFNNIIIGGSIYMGQIQKEVKNFSIENINVLKEKRVG IFICGLNEKDIEAQLNNAFPKELLTNAVAKECFGGECILKNMNFFERFIMKKVSKIDKDTSKISEENINKFTQSINDNYS NK
Sequences:
>Translated_162_residues MKTLIVYGTKHGTTEKCSKLLKDKLSGEVVIINIKKENMPDITTFNNIIIGGSIYMGQIQKEVKNFSIENINVLKEKRVG IFICGLNEKDIEAQLNNAFPKELLTNAVAKECFGGECILKNMNFFERFIMKKVSKIDKDTSKISEENINKFTQSINDNYS NK >Mature_162_residues MKTLIVYGTKHGTTEKCSKLLKDKLSGEVVIINIKKENMPDITTFNNIIIGGSIYMGQIQKEVKNFSIENINVLKEKRVG IFICGLNEKDIEAQLNNAFPKELLTNAVAKECFGGECILKNMNFFERFIMKKVSKIDKDTSKISEENINKFTQSINDNYS NK
Specific function: Unknown
COG id: COG4635
COG function: function code CH; Flavodoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18407; Mature: 18407
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIVYGTKHGTTEKCSKLLKDKLSGEVVIINIKKENMPDITTFNNIIIGGSIYMGQIQ CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHH KEVKNFSIENINVLKEKRVGIFICGLNEKDIEAQLNNAFPKELLTNAVAKECFGGECILK HHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEH NMNFFERFIMKKVSKIDKDTSKISEENINKFTQSINDNYSNK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTLIVYGTKHGTTEKCSKLLKDKLSGEVVIINIKKENMPDITTFNNIIIGGSIYMGQIQ CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHH KEVKNFSIENINVLKEKRVGIFICGLNEKDIEAQLNNAFPKELLTNAVAKECFGGECILK HHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEH NMNFFERFIMKKVSKIDKDTSKISEENINKFTQSINDNYSNK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA