| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fchA
Identifier: 170756609
GI number: 170756609
Start: 1297902
End: 1298534
Strand: Direct
Name: fchA
Synonym: CLD_3398
Alternate gene names: 170756609
Gene position: 1297902-1298534 (Clockwise)
Preceding gene: 170756187
Following gene: 170754644
Centisome position: 32.79
GC content: 29.86
Gene sequence:
>633_bases GTGTTAGATAAAAGTTGTAAAGAATTTATAGATATTTTATCCTCTAAGGAACCTGTACCAGGTGGAGGCGGTGCTTGTGC TTATGTAGGAGCTTTAGGTATGGCCTTAGGCAATATGGTAGCAAATCTTACTATAGGGAAGAAAAAATATAAAGATGTAG AAGAGGATGTAAAAGAAATATTAAAAGAAGGAGAAATCTTAATACAGAAATTAGAGGAATTAGTAAATAAAGATGCTGAA GTATTTTATCCATTATCTAAAGCTTATGGATTACCTAAAAATACAGAAGAGGAAAAAGCATATAAAGATAAAATTATGGA AGAGGCATTATATAACGCTAGTTTAGTGCCTCTAGAAATAGCTAAATGTGCAGCAGAGACCATAAATCTTCATTATAAAT TAGCTAAGATAGGAACTAGAATTGCTATAAGTGATGTAGGTGTAGGAGTGCTATTTTGCAAAACAGCACTAGAAGCTTCT AAGTTAAATGTATATATAAATACTGGTATGATGAAAAATAATGATATAAAAAATTCTTTGGAAGAAGAAATCAACACCTT AGTTTCTAAATATTCAACTAAGGCAGATAAAGTTTATAGTTATGTAGAAAATTTAATAAGGGGAAATGAATAA
Upstream 100 bases:
>100_bases ATGTATAATATATATTAGTATTATAGAAAGTGTAATTAATTTAGTATAGTATTTAGTATTTACTATAATAAGAATAAATT AATAAGGTAGGTGGATTTTT
Downstream 100 bases:
>100_bases TGACTAAAATATTATATGGAAATGAAGTAGCTTTAAAAATAAAGGAAGATTTAAATTTAAGAATGGACAAATTAAAAGAA AAAAATATAATACCTAAGTT
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTIGKKKYKDVEEDVKEILKEGEILIQKLEELVNKDAE VFYPLSKAYGLPKNTEEEKAYKDKIMEEALYNASLVPLEIAKCAAETINLHYKLAKIGTRIAISDVGVGVLFCKTALEAS KLNVYINTGMMKNNDIKNSLEEEINTLVSKYSTKADKVYSYVENLIRGNE
Sequences:
>Translated_210_residues MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTIGKKKYKDVEEDVKEILKEGEILIQKLEELVNKDAE VFYPLSKAYGLPKNTEEEKAYKDKIMEEALYNASLVPLEIAKCAAETINLHYKLAKIGTRIAISDVGVGVLFCKTALEAS KLNVYINTGMMKNNDIKNSLEEEINTLVSKYSTKADKVYSYVENLIRGNE >Mature_210_residues MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTIGKKKYKDVEEDVKEILKEGEILIQKLEELVNKDAE VFYPLSKAYGLPKNTEEEKAYKDKIMEEALYNASLVPLEIAKCAAETINLHYKLAKIGTRIAISDVGVGVLFCKTALEAS KLNVYINTGMMKNNDIKNSLEEEINTLVSKYSTKADKVYSYVENLIRGNE
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3404
COG function: function code E; Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=167, Percent_Identity=26.9461077844311, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI11140815, Length=167, Percent_Identity=26.9461077844311, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 23142; Mature: 23142
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTIGKKKYKDVEEDVKEI CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LKEGEILIQKLEELVNKDAEVFYPLSKAYGLPKNTEEEKAYKDKIMEEALYNASLVPLEI HHHHHHHHHHHHHHHCCCHHEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AKCAAETINLHYKLAKIGTRIAISDVGVGVLFCKTALEASKLNVYINTGMMKNNDIKNSL HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH EEEINTLVSKYSTKADKVYSYVENLIRGNE HHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTIGKKKYKDVEEDVKEI CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LKEGEILIQKLEELVNKDAEVFYPLSKAYGLPKNTEEEKAYKDKIMEEALYNASLVPLEI HHHHHHHHHHHHHHHCCCHHEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH AKCAAETINLHYKLAKIGTRIAISDVGVGVLFCKTALEASKLNVYINTGMMKNNDIKNSL HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH EEEINTLVSKYSTKADKVYSYVENLIRGNE HHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]