| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pstC
Identifier: 170756588
GI number: 170756588
Start: 2651238
End: 2652161
Strand: Reverse
Name: pstC
Synonym: CLD_2111
Alternate gene names: 170756588
Gene position: 2652161-2651238 (Counterclockwise)
Preceding gene: 170755717
Following gene: 170757420
Centisome position: 67.0
GC content: 30.41
Gene sequence:
>924_bases ATGCATATAAGCAATAGGAAGATTTCTAGCACAGAAATATCTAAAAGAAAGCTATTGAAAAACTTAAGAAATGAATACAT AGGAAGAGGACTATCAACCATATGTGGAGTGTTAATAGTTTTTTTAACTTTATCAATAATATTTTTTGTAGCCTTAAAAG GTATAGCAGTGTTTTCAAAGGGAGTTTCATTAAAAGAATTTTTATTTTCTACTAATTGGAGTCCAGATAATGATGTCCCT AGATTTGGGGCATTAAACTTTATAGCAGGATCTACTTTTGTATCTATTGGTGCAGTAATATTAAGCGCTCCAGTAAGTAT AGCTTTAGCTATATTTATAAATTATATATCTCCTAAATTAGGAGATAAAGTTTTAAAGCCTGCTTTAGAATTATTTGTAG GTATTCCTTCAGTGGTATATGGATGGTTAGGTATAAGTATATTATTACCAATTATAAAAAGAGTTTACGGGGGAACAGGT TTTAGTATTTTAGCAGGAATAATAGTTTTAAGTATAATGATATTGCCAACTATAGCTAGTATTTCTGTTGATGCAATAAA AGTAGTTCCTAAATCTTATTTACAAGCTTCCTATGGATTAGGAGCAACTAGATGGCAAACTATAAGTAATGTTATAGTAC CTTCAGCTAAAGATGGAATATTAACAGGTATTATATTAGGGCTTGCAAGAGCTTTTGGAGAAGCTTTAGCTGTTCAAATG GTAATAGGAAACTCTATTCAGTTCCCTAATAAATTATTGAATCCAGCTTCTACATTAACAAGTGTTATTACTATGGATAT GGCAAATACCATAGGAGGAACAGTATGGAATGATGCACTTTGGGCTTTAGCACTATTACTTTTAATAATATCATTCTTAT TCATAATAGCAATTAGGATTATAAGTAGAAGGAGGGAAGACTAA
Upstream 100 bases:
>100_bases AACTTTAAAGATGAAGAAGATAACTATTTAAATGGGGTTTAACAATATGTAATAGGTTATGACCCCATTTAAAACAATAA TTATTAGAGGAAGATGATTT
Downstream 100 bases:
>100_bases TGAATTCTAAATTAATAGATAAAATTTGGACGGCTATATTATATTTTATTTCTGCAATGGTAGTTTTTTTATTATTAATA CTTCTAGGATATATATTAAT
Product: phosphate ABC transporter, permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MHISNRKISSTEISKRKLLKNLRNEYIGRGLSTICGVLIVFLTLSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVP RFGALNFIAGSTFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTG FSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTGIILGLARAFGEALAVQM VIGNSIQFPNKLLNPASTLTSVITMDMANTIGGTVWNDALWALALLLLIISFLFIIAIRIISRRRED
Sequences:
>Translated_307_residues MHISNRKISSTEISKRKLLKNLRNEYIGRGLSTICGVLIVFLTLSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVP RFGALNFIAGSTFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTG FSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTGIILGLARAFGEALAVQM VIGNSIQFPNKLLNPASTLTSVITMDMANTIGGTVWNDALWALALLLLIISFLFIIAIRIISRRRED >Mature_307_residues MHISNRKISSTEISKRKLLKNLRNEYIGRGLSTICGVLIVFLTLSIIFFVALKGIAVFSKGVSLKEFLFSTNWSPDNDVP RFGALNFIAGSTFVSIGAVILSAPVSIALAIFINYISPKLGDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTG FSILAGIIVLSIMILPTIASISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTGIILGLARAFGEALAVQM VIGNSIQFPNKLLNPASTLTSVITMDMANTIGGTVWNDALWALALLLLIISFLFIIAIRIISRRRED
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=259, Percent_Identity=32.8185328185328, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1790163, Length=300, Percent_Identity=24, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33050; Mature: 33050
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHISNRKISSTEISKRKLLKNLRNEYIGRGLSTICGVLIVFLTLSIIFFVALKGIAVFSK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSAPVSIALAIFINYISPKL CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTGFSILAGIIVLSIMILPTIAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTGIILGLARAFGEALAVQM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VIGNSIQFPNKLLNPASTLTSVITMDMANTIGGTVWNDALWALALLLLIISFLFIIAIRI HHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRRRED HHHHCCC >Mature Secondary Structure MHISNRKISSTEISKRKLLKNLRNEYIGRGLSTICGVLIVFLTLSIIFFVALKGIAVFSK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVSLKEFLFSTNWSPDNDVPRFGALNFIAGSTFVSIGAVILSAPVSIALAIFINYISPKL CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH GDKVLKPALELFVGIPSVVYGWLGISILLPIIKRVYGGTGFSILAGIIVLSIMILPTIAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ISVDAIKVVPKSYLQASYGLGATRWQTISNVIVPSAKDGILTGIILGLARAFGEALAVQM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VIGNSIQFPNKLLNPASTLTSVITMDMANTIGGTVWNDALWALALLLLIISFLFIIAIRI HHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRRRED HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]