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The map label for this gene is nifE [H]

Identifier: 170756569

GI number: 170756569

Start: 811549

End: 812787

Strand: Direct

Name: nifE [H]

Synonym: CLD_0074

Alternate gene names: 170756569

Gene position: 811549-812787 (Clockwise)

Preceding gene: 170755959

Following gene: 170755619

Centisome position: 20.5

GC content: 35.59

Gene sequence:

>1239_bases
TTGGGGATTCATAAGTTCAAACCACCAATGTCAGGTAGAATGGGAGTATTATGGACTCTTGCTTCAATTCGTGATGCAGC
TTTAATTGAATACGGATGCATGGGACACATGCAGTATGGGAGAATGTTTTTAAATCAAGCTGGTATATCCAGAGGGTGCA
AACTATATTCTACTCACATTGACGAAACAGACATTTCATTAGGAGATACTAGAAGACTCAATCGTACTATTGCTCAAATT
GTAGAAAGAGATAAGCCTAAAATTATTTTTTTGTTGCCATCCTCAGTGCCAACAGTTATTGGAACAGACTTAGTGGCTAT
ATGTGAAGAATTACAACCGGAATACCCTAATATTTCTTTACTTCCATTTGGATGTGGAAGCTTTGATATAGATGGATATC
GTGGTGTTGAGGAAGCACTTTTGCTTCTTTCAAAAATGTTACCAAAGGATGTAGAAAAAACGGAAGAACCTACATTCAAC
ATAATTGGTTCCTGTGCTGATTTATTTCGATTTAATGCTGATGCAGAAGAGATTATCCGCATAATGAAGGGTGCCTTTGG
TATGGAGAAACTTTGCGTTATGACCTCTGATACATCTGTAGAGCAAATTGAGAATATGGGAGGTGCTCATATTAATTTAG
TAATACGACAAGAAGGAGAGCCCGCTGCAAAACAATTGAAGAAGAGATTTGGAACCCCATATTTATTGGCTAGGCCTTAC
GGAATTGAGGGAACTTTAGAATGGATAGATAAGATAGCTAAGATTTCTGGGTTAACTTTAGATAATAGTTTTATAAAATC
AGAAAAAGAAAAAAGCATGATTCAAATTTCTCCTGCAATTTTTGCTTTTCAACATGTAATACGAGAACATCCTGATGAAG
CAAGAATTTCATTAGGAGGTCATAGAGATGTGGTAAAAGGTATTCTTTCTTATGCAGAAGAAGAATTATCCTTAATTAGA
GGAACTTGTTGGTGCGACTCAGAAGCTATGGCAAGTGAAGAAATTCCCTATTTTTCCGAAGATGAATGGGTACAGGCTAT
AGAATCTGAGGAAAATGGACTTCTAATGGCAAGTGGAGAAGCTTTAAAATGGGCAAAAAGAAATATAGATCTTCAAATAT
CTAACCCAGATATAAAATGGAGACTAAATCCTTATGAATCTCCATTTATTGGCTTTCGCGGATCTATAAATTTAGTTAAC
TTATGGCTCAATGGTCTTTTAGATAAAATAAATGATTAA

Upstream 100 bases:

>100_bases
AACCGCAGTTTTATTAAGTAGAATGTTAAAGGTTTATAGTAAAATAAATGTTAAAGAATAAGGAGGTAAAGTAAATGTTA
AAAAATAAGGAGGTAAAGTT

Downstream 100 bases:

>100_bases
ATATATACTCTTAATATCTTATATTACAAAAAGTTGTTGAATTTAAACCCAATGCTGAAATAATTATTTAATATTTAATT
GAAATATTAGGACTTACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNISLLPFGCGSFDIDGYRGVEEALLLLSKMLPKDVEKTEEPTFN
IIGSCADLFRFNADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKKRFGTPYLLARPY
GIEGTLEWIDKIAKISGLTLDNSFIKSEKEKSMIQISPAIFAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GTCWCDSEAMASEEIPYFSEDEWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNPYESPFIGFRGSINLVN
LWLNGLLDKIND

Sequences:

>Translated_412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNISLLPFGCGSFDIDGYRGVEEALLLLSKMLPKDVEKTEEPTFN
IIGSCADLFRFNADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKKRFGTPYLLARPY
GIEGTLEWIDKIAKISGLTLDNSFIKSEKEKSMIQISPAIFAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GTCWCDSEAMASEEIPYFSEDEWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNPYESPFIGFRGSINLVN
LWLNGLLDKIND
>Mature_411_residues
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQIV
ERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNISLLPFGCGSFDIDGYRGVEEALLLLSKMLPKDVEKTEEPTFNI
IGSCADLFRFNADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKKRFGTPYLLARPYG
IEGTLEWIDKIAKISGLTLDNSFIKSEKEKSMIQISPAIFAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIRG
TCWCDSEAMASEEIPYFSEDEWVQAIESEENGLLMASGEALKWAKRNIDLQISNPDIKWRLNPYESPFIGFRGSINLVNL
WLNGLLDKIND

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005973 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 46200; Mature: 46069

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNISL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LPFGCGSFDIDGYRGVEEALLLLSKMLPKDVEKTEEPTFNIIGSCADLFRFNADAEEIIR
EECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
IMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKKRFGTPYLLARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEECCC
GIEGTLEWIDKIAKISGLTLDNSFIKSEKEKSMIQISPAIFAFQHVIREHPDEARISLGG
CCCHHHHHHHHHHHHCCCEECHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGTCWCDSEAMASEEIPYFSEDEWVQAIESEENGLLMASGE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCC
ALKWAKRNIDLQISNPDIKWRLNPYESPFIGFRGSINLVNLWLNGLLDKIND
HHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNISL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LPFGCGSFDIDGYRGVEEALLLLSKMLPKDVEKTEEPTFNIIGSCADLFRFNADAEEIIR
EECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
IMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKKRFGTPYLLARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEECCC
GIEGTLEWIDKIAKISGLTLDNSFIKSEKEKSMIQISPAIFAFQHVIREHPDEARISLGG
CCCHHHHHHHHHHHHCCCEECHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGTCWCDSEAMASEEIPYFSEDEWVQAIESEENGLLMASGE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCC
ALKWAKRNIDLQISNPDIKWRLNPYESPFIGFRGSINLVNLWLNGLLDKIND
HHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2726466 [H]