| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755959
Identifier: 170755959
GI number: 170755959
Start: 810241
End: 811509
Strand: Direct
Name: 170755959
Synonym: CLD_0075
Alternate gene names: NA
Gene position: 810241-811509 (Clockwise)
Preceding gene: 170754938
Following gene: 170756569
Centisome position: 20.47
GC content: 33.73
Gene sequence:
>1269_bases ATGAAGGAATTAAAACATCTAAAACCTTTATCTTCAGTTAAGACAAATGCCGGAGTAAAGTTTTTGACTCCAGCAGCTTT CCCAGGAAATCATTGTCCTATGCATACTGCATTAGCACTTAGTTCAAGGGTTAAGGGAATGTCTACATTGGTTGTAGGAA CACCAGAATGTGGAACCTATAGTCGTAATATTGTTTCGGGTATTAAAAGTGAAGAAGGTGAGCTGCATTGGACCTATATT TTAGATTCAAATGAGGTTGTATTTGGATGCCGCAGGGGATTGATTAGGACTATAAAAGAAATGGATAAGTCTGGTGCAAA AGCTATTATGATAATTTTAACTTGTGTCCCTGAGATAATTGGGGAAGATATAGAGGGCATTGTACATGAAATGCAGCCTG AAGTTTCAGCACAACTTACATTTGTATTAATGGCACATTTTAAATGTAATAGTTATCCTTCAGGTTATTGGAAAACTTTA GTAGCATTCGGAAACTTGATGAAGAAAGGGAAAAAAAGTACTGATACAATCAATATTCTTGGTCGTAGTCCAATAGAAAA ACATGTTCCTATGCCAGGATTATTAACAGCATTAGAAAAAAGAGGATTTTACCTTAGAATGCTTGCACCAAAATCTGATG TTGAGGATTTTATTGTTTCACCAGATGCAGCTCTTAATATTGTGCTTTCACCTTTCATGAATCCTTTGGCTGAAATGATG TGGGAGAAGTTTAAAGTTCCATTTATAAGTCTTCATGAAATTTATGATGTATTTGAGATTGATAGGCTCTATGAAGCTGT AGAAAAATCATTGAAAATCAGGTTTAACCATGAATTTGATGAATCAAGAGAAAAGGCTGTTGCATTGCAGAAACAGGTAA GAGATGTATTTAAAGGGAAAAGTTATATTTTAACTCACATTGGTGCTATGATGCCTTTGCCTTTTGTTTTATATCTAACT AAATTTGAAATGGAGCCTATGCTTTTACATATGGATGAATTTTATCCTGATGATAGAAAGTGGGCAAAAGCTATTAATGA GAAAGGTTATGATCCTATGATCTGTCATATGGTAAATAATGATGCGGATATAGAGCTTTTGGAGGGTATCAAGACAGATT TTTCTTTAGGAAAGCTTTTAAAGGATTCATCTTTAATTCCTTGCGTCCCATATCTAGAGGATTTGTATGGACAAATAGGA TATGAAAGAACCGCAGTTTTATTAAGTAGAATGTTAAAGGTTTATAGTAAAATAAATGTTAAAGAATAA
Upstream 100 bases:
>100_bases AAGCTTTAGGAAAAACTGTAGTTGAAGCCTTCCCTGAATGTGATATGGCAAAGCACTACGGTACTTTGGCAAAGATTCTG TTAGAGGGAGGGAAGTGATA
Downstream 100 bases:
>100_bases GGAGGTAAAGTAAATGTTAAAAAATAAGGAGGTAAAGTTTTGGGGATTCATAAGTTCAAACCACCAATGTCAGGTAGAAT GGGAGTATTATGGACTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKELKHLKPLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI LDSNEVVFGCRRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPDAALNIVLSPFMNPLAEMM WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAVALQKQVRDVFKGKSYILTHIGAMMPLPFVLYLT KFEMEPMLLHMDEFYPDDRKWAKAINEKGYDPMICHMVNNDADIELLEGIKTDFSLGKLLKDSSLIPCVPYLEDLYGQIG YERTAVLLSRMLKVYSKINVKE
Sequences:
>Translated_422_residues MKELKHLKPLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI LDSNEVVFGCRRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPDAALNIVLSPFMNPLAEMM WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAVALQKQVRDVFKGKSYILTHIGAMMPLPFVLYLT KFEMEPMLLHMDEFYPDDRKWAKAINEKGYDPMICHMVNNDADIELLEGIKTDFSLGKLLKDSSLIPCVPYLEDLYGQIG YERTAVLLSRMLKVYSKINVKE >Mature_422_residues MKELKHLKPLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYI LDSNEVVFGCRRGLIRTIKEMDKSGAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTL VAFGNLMKKGKKSTDTINILGRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPDAALNIVLSPFMNPLAEMM WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAVALQKQVRDVFKGKSYILTHIGAMMPLPFVLYLT KFEMEPMLLHMDEFYPDDRKWAKAINEKGYDPMICHMVNNDADIELLEGIKTDFSLGKLLKDSSLIPCVPYLEDLYGQIG YERTAVLLSRMLKVYSKINVKE
Specific function: Unknown
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47844; Mature: 47844
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELKHLKPLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTY CCCHHHCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC SRNIVSGIKSEEGELHWTYILDSNEVVFGCRRGLIRTIKEMDKSGAKAIMIILTCVPEII HHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTLVAFGNLMKKGKKSTDTINIL CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE GRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPDAALNIVLSPFMNPLAEMM CCCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAVALQKQVRDVFKGK HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCC SYILTHIGAMMPLPFVLYLTKFEMEPMLLHMDEFYPDDRKWAKAINEKGYDPMICHMVNN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECC DADIELLEGIKTDFSLGKLLKDSSLIPCVPYLEDLYGQIGYERTAVLLSRMLKVYSKINV CCCHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC KE CC >Mature Secondary Structure MKELKHLKPLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVKGMSTLVVGTPECGTY CCCHHHCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC SRNIVSGIKSEEGELHWTYILDSNEVVFGCRRGLIRTIKEMDKSGAKAIMIILTCVPEII HHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTLVAFGNLMKKGKKSTDTINIL CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE GRSPIEKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPDAALNIVLSPFMNPLAEMM CCCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH WEKFKVPFISLHEIYDVFEIDRLYEAVEKSLKIRFNHEFDESREKAVALQKQVRDVFKGK HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCC SYILTHIGAMMPLPFVLYLTKFEMEPMLLHMDEFYPDDRKWAKAINEKGYDPMICHMVNN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECC DADIELLEGIKTDFSLGKLLKDSSLIPCVPYLEDLYGQIGYERTAVLLSRMLKVYSKINV CCCHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC KE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA