| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756545
Identifier: 170756545
GI number: 170756545
Start: 725383
End: 726294
Strand: Direct
Name: 170756545
Synonym: CLD_0153
Alternate gene names: NA
Gene position: 725383-726294 (Clockwise)
Preceding gene: 170755928
Following gene: 170754290
Centisome position: 18.33
GC content: 27.74
Gene sequence:
>912_bases ATGAAAGAAATAATAATGATGATTAATCCCTTTAAGGAAGACGTAGGTGATATTTCTAAGAAAGTATATGTAATTAAAAA ATTACTTAGCTTTATTGTAGTACTTATATCATCTAAGCTTATTGCACAGGCTATAGTAATATTAGGATTAGCTACAGCAG GTTATGATTTTTTACATGGAGAAATGCCTAGTAACGATGTTATGATGTTAATTAAGCATTATGGGGTTTCGATTAACTTG GTAATAACAATACTATATTGCAAGTTTATAGAAAAGAGAAATTTAGAAAGTATGGGGATTGTAAAAAAGAAAATTGCAAA ATCGTATTTTTTAGGAACAGGAATAGCAGTAATACTACTTTGTATTATATTTGTTTTAAGCATATTCAGTGAGGCTGTTG TATATTATGGGAAAAATGATGATATAAATATAATCCTTATTTTGGCATACCTAGGAGGTTTTATTATTCAAGGGGCTATG GAAGAAATTATGTGTAGAGGATTTTTGATGAATTCACTTCTATATAAAATTCCTACTAGCATAGCAATATTGATTAGTTC AATTATATTTGCATTCCCACATTTTTTTGCGCTTTTTCAGTCTAATATAATAGTTGCAATTGTAGGAATAGTTAATTTGT TATTATTTTCAACAGTAGTATCTTTGTTGATGATTAAGTATAATAATATATGGGTATCATGTGCTGTTCATAGTATTTGG AATTTTATACTATCAATTATAATTGGAATTAATCTGAGCGGTTCAAATAGTGAATCATCAGTATTTAAATTTAATGCTAA TGAAAATATGAAACTGTTAAGTGGTGGCACATATGGAATAGAGGCTGGGCTAATTTGTACAATAGTATTAATTTTGTTTG CTATAGTATTAGGTAGAAAGGTTAAGAGGTAA
Upstream 100 bases:
>100_bases AAGTTCAATTGGTAGACATTATTAAAGAGAAAATGTAAACTTTGCTGTAAGAAAAAGTATATTTATTTTTATATAAATAA TTAGTTGGGGGGCAGAGTTT
Downstream 100 bases:
>100_bases AGAGGTAGGGCGATGGCGTTTAGTAATAAATTATATTCTTTGAGAAAGCAAAAAGGATTATCACAAGATGAATTAGGTAG CAAGTTAAATGTTTCAAGAC
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: Caax Amino Protease Family; Protease; Abortive Infection Protein; CAAX Amino Protease
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKEIIMMINPFKEDVGDISKKVYVIKKLLSFIVVLISSKLIAQAIVILGLATAGYDFLHGEMPSNDVMMLIKHYGVSINL VITILYCKFIEKRNLESMGIVKKKIAKSYFLGTGIAVILLCIIFVLSIFSEAVVYYGKNDDINIILILAYLGGFIIQGAM EEIMCRGFLMNSLLYKIPTSIAILISSIIFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKYNNIWVSCAVHSIW NFILSIIIGINLSGSNSESSVFKFNANENMKLLSGGTYGIEAGLICTIVLILFAIVLGRKVKR
Sequences:
>Translated_303_residues MKEIIMMINPFKEDVGDISKKVYVIKKLLSFIVVLISSKLIAQAIVILGLATAGYDFLHGEMPSNDVMMLIKHYGVSINL VITILYCKFIEKRNLESMGIVKKKIAKSYFLGTGIAVILLCIIFVLSIFSEAVVYYGKNDDINIILILAYLGGFIIQGAM EEIMCRGFLMNSLLYKIPTSIAILISSIIFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKYNNIWVSCAVHSIW NFILSIIIGINLSGSNSESSVFKFNANENMKLLSGGTYGIEAGLICTIVLILFAIVLGRKVKR >Mature_303_residues MKEIIMMINPFKEDVGDISKKVYVIKKLLSFIVVLISSKLIAQAIVILGLATAGYDFLHGEMPSNDVMMLIKHYGVSINL VITILYCKFIEKRNLESMGIVKKKIAKSYFLGTGIAVILLCIIFVLSIFSEAVVYYGKNDDINIILILAYLGGFIIQGAM EEIMCRGFLMNSLLYKIPTSIAILISSIIFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKYNNIWVSCAVHSIW NFILSIIIGINLSGSNSESSVFKFNANENMKLLSGGTYGIEAGLICTIVLILFAIVLGRKVKR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33575; Mature: 33575
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIMMINPFKEDVGDISKKVYVIKKLLSFIVVLISSKLIAQAIVILGLATAGYDFLHG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC EMPSNDVMMLIKHYGVSINLVITILYCKFIEKRNLESMGIVKKKIAKSYFLGTGIAVILL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CIIFVLSIFSEAVVYYGKNDDINIILILAYLGGFIIQGAMEEIMCRGFLMNSLLYKIPTS HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAILISSIIFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKYNNIWVSCAVHSIW HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH NFILSIIIGINLSGSNSESSVFKFNANENMKLLSGGTYGIEAGLICTIVLILFAIVLGRK HHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VKR CCC >Mature Secondary Structure MKEIIMMINPFKEDVGDISKKVYVIKKLLSFIVVLISSKLIAQAIVILGLATAGYDFLHG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC EMPSNDVMMLIKHYGVSINLVITILYCKFIEKRNLESMGIVKKKIAKSYFLGTGIAVILL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CIIFVLSIFSEAVVYYGKNDDINIILILAYLGGFIIQGAMEEIMCRGFLMNSLLYKIPTS HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAILISSIIFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKYNNIWVSCAVHSIW HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH NFILSIIIGINLSGSNSESSVFKFNANENMKLLSGGTYGIEAGLICTIVLILFAIVLGRK HHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH VKR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA