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The map label for this gene is 170754290

Identifier: 170754290

GI number: 170754290

Start: 726307

End: 726717

Strand: Direct

Name: 170754290

Synonym: CLD_0152

Alternate gene names: NA

Gene position: 726307-726717 (Clockwise)

Preceding gene: 170756545

Following gene: 170757133

Centisome position: 18.35

GC content: 28.71

Gene sequence:

>411_bases
ATGGCGTTTAGTAATAAATTATATTCTTTGAGAAAGCAAAAAGGATTATCACAAGATGAATTAGGTAGCAAGTTAAATGT
TTCAAGACAAACGATTTCTAAGTGGGAACTTGGCGAAACTACACCAGAACTAGAAAAATTAATAGCTTTAGGAGACTTTT
TTGAAATATCTCTAGATGAATTAGTAATGGACGTAAAAGCAAAAGAGAGTGTAAAGACAGAACCATTAGTAATGAATAGG
CTTGAAACAATAATTGATAGCATTGATGGAGAAAATGTTAAGATGTATACAAAGAAAATATCCAAAATAGTACTAATAAT
TATGGTAATAATTCTTGCTATTGACTTGATTTCAATGATTGTGTACTTTATACTTAGTGTTTTCCGGTATAAACATTTAT
ATAGTAGATGA

Upstream 100 bases:

>100_bases
TGGCACATATGGAATAGAGGCTGGGCTAATTTGTACAATAGTATTAATTTTGTTTGCTATAGTATTAGGTAGAAAGGTTA
AGAGGTAAAGAGGTAGGGCG

Downstream 100 bases:

>100_bases
TTTTTTGCTAACCAATAGAATATAATAACAACAAATAAATTTAACCTTTATTTTGTTTTAGAAGTATTAGATCAATTAAA
TAAGAATTCAATTAATCAAA

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcription Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESVKTEPLVMNR
LETIIDSIDGENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILSVFRYKHLYSR

Sequences:

>Translated_136_residues
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESVKTEPLVMNR
LETIIDSIDGENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILSVFRYKHLYSR
>Mature_135_residues
AFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDELVMDVKAKESVKTEPLVMNRL
ETIIDSIDGENVKMYTKKISKIVLIIMVIILAIDLISMIVYFILSVFRYKHLYSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15664; Mature: 15533

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDE
CCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVMDVKAKESVKTEPLVMNRLETIIDSIDGENVKMYTKKISKIVLIIMVIILAIDLISMI
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFILSVFRYKHLYSR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELEKLIALGDFFEISLDE
CCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVMDVKAKESVKTEPLVMNRLETIIDSIDGENVKMYTKKISKIVLIIMVIILAIDLISMI
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFILSVFRYKHLYSR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA