Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756543

Identifier: 170756543

GI number: 170756543

Start: 2030701

End: 2031171

Strand: Reverse

Name: 170756543

Synonym: CLD_2725

Alternate gene names: NA

Gene position: 2031171-2030701 (Counterclockwise)

Preceding gene: 170755457

Following gene: 170756908

Centisome position: 51.32

GC content: 23.14

Gene sequence:

>471_bases
ATGAAACAAAGGAATAATTCAATTTTAAAGGAACTTAATTGTGTATTAAGTTCCCTTGAAATAAAATATCATGATATAGT
AGGAAGTAATGAAAATCACGTGTTATATTTATGTATTATTGGAGATGAAAAATATAAATTCCATTTTAGAATTGAAGTTA
ACTTTTCAAATAACACTATTGGATTTTTTAATAATAGTATTAAAAATATAAAAACAGATAAATTTAATGAAGCGTTGCAA
GTATTAAATGAATTAAATAACTGCAACGCTATTGGTACGGTTTATTTAAATAAGGAAGATGAAAGTATATACTATTATAT
TGGTATATCAATTGAAGGTGAAGAAGTTTGCTTTTCACATGATCAAATTTCTGATTATATATTAACTCTTAAATTAGGAG
TTAAAGAAGCATTTGAAGCATTACAAGAAAATGATATTCTAAAATTTAACAAACGTATTCAGAAGGTTTAA

Upstream 100 bases:

>100_bases
GTTGAATTTTTACTATATGATGGTTCAAATAGAGAAATCGAATATAAAATCAAAAACTACTTTTTAAATAAGAAAAAGCA
TAATATTGAGGTGTGACACT

Downstream 100 bases:

>100_bases
ATATGGATGATAGTAAAAATATATACATATCAATAATTATTTTTATATCAATAGTTATTGCAAGAATTTTGGTTAATGAA
TTACAAGATAAATATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKQRNNSILKELNCVLSSLEIKYHDIVGSNENHVLYLCIIGDEKYKFHFRIEVNFSNNTIGFFNNSIKNIKTDKFNEALQ
VLNELNNCNAIGTVYLNKEDESIYYYIGISIEGEEVCFSHDQISDYILTLKLGVKEAFEALQENDILKFNKRIQKV

Sequences:

>Translated_156_residues
MKQRNNSILKELNCVLSSLEIKYHDIVGSNENHVLYLCIIGDEKYKFHFRIEVNFSNNTIGFFNNSIKNIKTDKFNEALQ
VLNELNNCNAIGTVYLNKEDESIYYYIGISIEGEEVCFSHDQISDYILTLKLGVKEAFEALQENDILKFNKRIQKV
>Mature_156_residues
MKQRNNSILKELNCVLSSLEIKYHDIVGSNENHVLYLCIIGDEKYKFHFRIEVNFSNNTIGFFNNSIKNIKTDKFNEALQ
VLNELNNCNAIGTVYLNKEDESIYYYIGISIEGEEVCFSHDQISDYILTLKLGVKEAFEALQENDILKFNKRIQKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18140; Mature: 18140

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRNNSILKELNCVLSSLEIKYHDIVGSNENHVLYLCIIGDEKYKFHFRIEVNFSNNTI
CCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCEE
GFFNNSIKNIKTDKFNEALQVLNELNNCNAIGTVYLNKEDESIYYYIGISIEGEEVCFSH
EEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEECC
DQISDYILTLKLGVKEAFEALQENDILKFNKRIQKV
CCCCEEEEEEEECHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MKQRNNSILKELNCVLSSLEIKYHDIVGSNENHVLYLCIIGDEKYKFHFRIEVNFSNNTI
CCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCEE
GFFNNSIKNIKTDKFNEALQVLNELNNCNAIGTVYLNKEDESIYYYIGISIEGEEVCFSH
EEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEECC
DQISDYILTLKLGVKEAFEALQENDILKFNKRIQKV
CCCCEEEEEEEECHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA