| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756908
Identifier: 170756908
GI number: 170756908
Start: 2030237
End: 2030698
Strand: Reverse
Name: 170756908
Synonym: CLD_2726
Alternate gene names: NA
Gene position: 2030698-2030237 (Counterclockwise)
Preceding gene: 170756543
Following gene: 170757698
Centisome position: 51.3
GC content: 18.61
Gene sequence:
>462_bases ATGGATGATAGTAAAAATATATACATATCAATAATTATTTTTATATCAATAGTTATTGCAAGAATTTTGGTTAATGAATT ACAAGATAAATATATTTTAATTATTATGTCATCTATTAATGTAATTGCATTAGCTGTTGTTTTAATTATTATTCCATATA ATACTTATAGAAAAATGGAAAATACTCAAATAGAATTAGGAAAGCAATATAATGATGAAGTTCCTATAAATTCTCATATG AAGAAGTTTAAATCTAAATTTCGTATTTATACAATAATTATAATGATTTTAATGCTAATCTATTTAATATATTTTAGAAG TAGCTTATGTAATGATATATTTAGTATATTAGCACTGGTTTTGTCAATAAATGATGATGCATTTATAAATAAATTATTTG AATATAACTATAAATCATATTATGGGAATGAAATGGATGAATATCTAAATAATTTTAAATAA
Upstream 100 bases:
>100_bases ATTATATATTAACTCTTAAATTAGGAGTTAAAGAAGCATTTGAAGCATTACAAGAAAATGATATTCTAAAATTTAACAAA CGTATTCAGAAGGTTTAAAT
Downstream 100 bases:
>100_bases AAATAAGACAAAAGAAAAGGAATAATATAAATATGAAAACATCAAAAGTTATAAAATCAGGAGTATTAGAAATATTTAAT GATCTACCATGCTATGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDDSKNIYISIIIFISIVIARILVNELQDKYILIIMSSINVIALAVVLIIIPYNTYRKMENTQIELGKQYNDEVPINSHM KKFKSKFRIYTIIIMILMLIYLIYFRSSLCNDIFSILALVLSINDDAFINKLFEYNYKSYYGNEMDEYLNNFK
Sequences:
>Translated_153_residues MDDSKNIYISIIIFISIVIARILVNELQDKYILIIMSSINVIALAVVLIIIPYNTYRKMENTQIELGKQYNDEVPINSHM KKFKSKFRIYTIIIMILMLIYLIYFRSSLCNDIFSILALVLSINDDAFINKLFEYNYKSYYGNEMDEYLNNFK >Mature_153_residues MDDSKNIYISIIIFISIVIARILVNELQDKYILIIMSSINVIALAVVLIIIPYNTYRKMENTQIELGKQYNDEVPINSHM KKFKSKFRIYTIIIMILMLIYLIYFRSSLCNDIFSILALVLSINDDAFINKLFEYNYKSYYGNEMDEYLNNFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18115; Mature: 18115
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDSKNIYISIIIFISIVIARILVNELQDKYILIIMSSINVIALAVVLIIIPYNTYRKME CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHC NTQIELGKQYNDEVPINSHMKKFKSKFRIYTIIIMILMLIYLIYFRSSLCNDIFSILALV CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSINDDAFINKLFEYNYKSYYGNEMDEYLNNFK HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MDDSKNIYISIIIFISIVIARILVNELQDKYILIIMSSINVIALAVVLIIIPYNTYRKME CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHC NTQIELGKQYNDEVPINSHMKKFKSKFRIYTIIIMILMLIYLIYFRSSLCNDIFSILALV CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSINDDAFINKLFEYNYKSYYGNEMDEYLNNFK HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA