| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756434
Identifier: 170756434
GI number: 170756434
Start: 3888703
End: 3889338
Strand: Reverse
Name: 170756434
Synonym: CLD_0912
Alternate gene names: NA
Gene position: 3889338-3888703 (Counterclockwise)
Preceding gene: 170755980
Following gene: 170756694
Centisome position: 98.26
GC content: 33.49
Gene sequence:
>636_bases ATGAAAGTTGTAGTTTTTAACGGAAGTCCCAATAAGGAGGGTAATACTTATCATGGAATAAAAATAGTCATTGACGAACT AGAAAAGGAAGGAATAGAAACAGAAATAATTCACGTCGGGAATAAATCTATTAGAGGATGTATTGCTTGTGGATATTGTA CAAAAAATAAGAATGGAAAATGTGCTATTACTACTGATCCAGTTAATGATTGGATTGAAAAGATGAAAGATGCCGATGGA ATAATCTTAGGATCACCAGTACACTATTCAGCAATCGCTGGAACAATGAAATCATTTTTAGATAGAGCTTTTCATGTGGC AGATGCCAATGATAGTATGCTAAGACATAAAGTTGGAGTTGCAGTAGTAGCAGTAAGGCGTGCAGGTGGAATTCCAACCT TCAATCAGTTGAATAATTACATTAATCATTCTGAAATGCTCATCCCTACTTCAAACTATTGGAATATTATTAATGGAAGA TTACCAGGTGAGGCAATGCAGGACGAAGAAGGAATACAAATAATGAGGATATTAGGTAAGAATATGGCTTGGCTTATGAA ACTTATTAAAAATGAAAAAGGAGCTATCAAAAATCCAGAAAGAGAAGAAAAGATTTTTACTAATTTTATTCGATGA
Upstream 100 bases:
>100_bases AAGATATCTAATTGGTACAAGAACTATCCCTAATTAAATCAATGCCTACTATATCAGTAAAGTGTGTAAATATTATTAAA TATATAAGGAGGAAAAATTA
Downstream 100 bases:
>100_bases AATATATTATTATAATCTAAGGAGGTGATTTATAAGTGTATCAATCAAATAACAAGTTTATAAAAACAAATTCATCAATA AATAATCTTGAAGCTAAACC
Product: putative NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKVVVFNGSPNKEGNTYHGIKIVIDELEKEGIETEIIHVGNKSIRGCIACGYCTKNKNGKCAITTDPVNDWIEKMKDADG IILGSPVHYSAIAGTMKSFLDRAFHVADANDSMLRHKVGVAVVAVRRAGGIPTFNQLNNYINHSEMLIPTSNYWNIINGR LPGEAMQDEEGIQIMRILGKNMAWLMKLIKNEKGAIKNPEREEKIFTNFIR
Sequences:
>Translated_211_residues MKVVVFNGSPNKEGNTYHGIKIVIDELEKEGIETEIIHVGNKSIRGCIACGYCTKNKNGKCAITTDPVNDWIEKMKDADG IILGSPVHYSAIAGTMKSFLDRAFHVADANDSMLRHKVGVAVVAVRRAGGIPTFNQLNNYINHSEMLIPTSNYWNIINGR LPGEAMQDEEGIQIMRILGKNMAWLMKLIKNEKGAIKNPEREEKIFTNFIR >Mature_211_residues MKVVVFNGSPNKEGNTYHGIKIVIDELEKEGIETEIIHVGNKSIRGCIACGYCTKNKNGKCAITTDPVNDWIEKMKDADG IILGSPVHYSAIAGTMKSFLDRAFHVADANDSMLRHKVGVAVVAVRRAGGIPTFNQLNNYINHSEMLIPTSNYWNIINGR LPGEAMQDEEGIQIMRILGKNMAWLMKLIKNEKGAIKNPEREEKIFTNFIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 23545; Mature: 23545
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVVFNGSPNKEGNTYHGIKIVIDELEKEGIETEIIHVGNKSIRGCIACGYCTKNKNGK CEEEEECCCCCCCCCEECHHHHHEEHHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCC CAITTDPVNDWIEKMKDADGIILGSPVHYSAIAGTMKSFLDRAFHVADANDSMLRHKVGV EEEEECCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH AVVAVRRAGGIPTFNQLNNYINHSEMLIPTSNYWNIINGRLPGEAMQDEEGIQIMRILGK HEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHCC NMAWLMKLIKNEKGAIKNPEREEKIFTNFIR CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKVVVFNGSPNKEGNTYHGIKIVIDELEKEGIETEIIHVGNKSIRGCIACGYCTKNKNGK CEEEEECCCCCCCCCEECHHHHHEEHHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCC CAITTDPVNDWIEKMKDADGIILGSPVHYSAIAGTMKSFLDRAFHVADANDSMLRHKVGV EEEEECCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH AVVAVRRAGGIPTFNQLNNYINHSEMLIPTSNYWNIINGRLPGEAMQDEEGIQIMRILGK HEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHCC NMAWLMKLIKNEKGAIKNPEREEKIFTNFIR CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]