| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is nfsA [C]
Identifier: 170755980
GI number: 170755980
Start: 3891824
End: 3892363
Strand: Reverse
Name: nfsA [C]
Synonym: CLD_0908
Alternate gene names: 170755980
Gene position: 3892363-3891824 (Counterclockwise)
Preceding gene: 170755093
Following gene: 170756434
Centisome position: 98.34
GC content: 33.52
Gene sequence:
>540_bases ATGTTTCAAGAAATTAGATCAAGAAGAAGTATACGAAAATATATTGATAAGCCAATTGAAGACGAAAAAATAATCGAGAT TATTGAGAGCGCTAGACTCGCCCCATCTGGTTCTAACACACAGCCTTGGCATTTTATTGTGGTAAAATCTGATATCACTA GGGAAAAGTTAGCTAAGGTATCCCATAATCAAGGATGGATGATGGATGCGCCAGTTTTTATTGCATGTGTTGCAGATATA CGATCTAGGATTAAAGAAGATATAGAACTATTATTGAATGAAAATAGCCCGCAACAAGAACTTAAGCAAATAATAAGAGA CACATCAATAGCTGTAGAACATTTAGTACTTTCCGCCGAAAACTTAGGTTTAGGCACTTGTTGGATTGCATGGTTTACTC AAGAAGAAGTTAGGCCAATTTTAAATATACCTTCTGATAAATATGTAGTTAGTATTATTACACTTGGTTACCCAAATGAA TCACCTAAAACTAGGCCAAGAAAAAAATTACAAGATATAATACATTATGAACAATGGTAA
Upstream 100 bases:
>100_bases TGATACAAATAAGTGCGTACTGGTAATAGTAATACATATATTCTAGAATAATGTTATATATTAAAAATAAAATTAATAGA ACAAGGAGGATTCTAATAAT
Downstream 100 bases:
>100_bases AGAATATTTTTATATTAAATTTAATGCTGCGATTAAAAACTATAGTGATTAATTGCAGCATTAAAATTTATATAATGAAG TTAGTATGCCAATATTTCGT
Product: nitroreductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MFQEIRSRRSIRKYIDKPIEDEKIIEIIESARLAPSGSNTQPWHFIVVKSDITREKLAKVSHNQGWMMDAPVFIACVADI RSRIKEDIELLLNENSPQQELKQIIRDTSIAVEHLVLSAENLGLGTCWIAWFTQEEVRPILNIPSDKYVVSIITLGYPNE SPKTRPRKKLQDIIHYEQW
Sequences:
>Translated_179_residues MFQEIRSRRSIRKYIDKPIEDEKIIEIIESARLAPSGSNTQPWHFIVVKSDITREKLAKVSHNQGWMMDAPVFIACVADI RSRIKEDIELLLNENSPQQELKQIIRDTSIAVEHLVLSAENLGLGTCWIAWFTQEEVRPILNIPSDKYVVSIITLGYPNE SPKTRPRKKLQDIIHYEQW >Mature_179_residues MFQEIRSRRSIRKYIDKPIEDEKIIEIIESARLAPSGSNTQPWHFIVVKSDITREKLAKVSHNQGWMMDAPVFIACVADI RSRIKEDIELLLNENSPQQELKQIIRDTSIAVEHLVLSAENLGLGTCWIAWFTQEEVRPILNIPSDKYVVSIITLGYPNE SPKTRPRKKLQDIIHYEQW
Specific function: Reduction Of Nitroaromatic Compounds Using NADH. Reduces Nitrofurazone By A Ping-Pong Bi-Bi Mechanism Possibly To Generate A Two-Electron Transfer Product. Major Component Of The Oxygen- Insensitive Nitroreductase Activity In E.Coli. [C]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=175, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 20806; Mature: 20806
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQEIRSRRSIRKYIDKPIEDEKIIEIIESARLAPSGSNTQPWHFIVVKSDITREKLAKV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH SHNQGWMMDAPVFIACVADIRSRIKEDIELLLNENSPQQELKQIIRDTSIAVEHLVLSAE CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC NLGLGTCWIAWFTQEEVRPILNIPSDKYVVSIITLGYPNESPKTRPRKKLQDIIHYEQW CCCCHHHHHEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFQEIRSRRSIRKYIDKPIEDEKIIEIIESARLAPSGSNTQPWHFIVVKSDITREKLAKV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH SHNQGWMMDAPVFIACVADIRSRIKEDIELLLNENSPQQELKQIIRDTSIAVEHLVLSAE CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC NLGLGTCWIAWFTQEEVRPILNIPSDKYVVSIITLGYPNESPKTRPRKKLQDIIHYEQW CCCCHHHHHEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]