Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756427

Identifier: 170756427

GI number: 170756427

Start: 1512151

End: 1514022

Strand: Direct

Name: 170756427

Synonym: CLD_3187

Alternate gene names: NA

Gene position: 1512151-1514022 (Clockwise)

Preceding gene: 170755167

Following gene: 170755533

Centisome position: 38.2

GC content: 29.81

Gene sequence:

>1872_bases
ATGAAAAAGCTATCCACAGGTATAGCTGTATTTTTATGTGCAATATTAATTTTAGGGCAGATCAGAATTGTTAAAAATGT
TATTTTCCCCAGTGAAATAAAACATGAAAATAATAGGATTCATTTAAATACAGGAAACACTATTAGAGTTTCTGGAAAAT
CTTCAAAAGAAATAGGTACTAAAGTTACAGATATATTGTTTCCAGCTTTCAATTATGAAGGTAAGCCTAACGGATTAATC
ATTTACAAGGGAGATAATTGGAAGGATATATTAGCTTTAATGCCCCTTGTTAAAAAATATAATAGCACTATAATACCTTT
CAATGAAAAAGATGAGAGCTCTCTTTTAGATTATATAAATAAATTAGAGCCAAAGGGTATTCCAAAATTAAATAATGCAC
AAGTTGTTATTTGCGGTGATAACATAAATACATTAAAAAACAATTTAGAAAGAAAAGGTATAAGGGTAACTAACATAAAT
TATAAAGATACAAATAGCCTTTTGGAGAAAGTCTATAATAGTGTTTTTTCTAATTCTGAAAAATGCTATGGCTATATAGT
TTCAGATGAGGATCCGTTAATGACTGTTCCAGTAGCTACCTGGATAGTTCAAAATGGGGGGGTGCCATTGTATTTAAATA
ATGAAAAGAAGCTTTATAATTCTTCAAAGAAAATATTGCCTAGCATAAGTAAGATATATGTAATTGGAAAGAAAAATAAT
GCTGATGAGGAAGCTATTAAATCTTTAAAAGTACCTGTGCAGAAAGTTTATGGATATAACCCTGAAAATTTTGCCATTAA
CTTTGCTAAGTTTTATGATAGAGAAGAAGGTTTTGGGTGGCATAGCAATAGAAGTAGAGATGATAGCAATCACAATTTTA
TATTATGCTCCAAGGAAGAACCATTAATGGCCTTAGTAGGAAGTCAACTTGCACTTAAAGGAAAAGTAGGGCCAATTCTT
TGGACAAATAAGAATTATTTATCTCCTCTAACAGAAAGCTACCTATGGAGAATGAAGCCTAATTATTGGGTAACTGCAGC
GGAAGGACCTTATAATAGTTTGTGGGTAATGGGTAATGAAGATATATTACCTTTTTCAATTCAAAGTAGGGTTGATTATA
CTCAAGAAATTCAACCTTATAAAACTATGGGGGACCAGGCAGTTAGCGGATTGGATGGTATTTCTATAATATTTAGTTTA
ATATCCATACTAGGTGCTATATGGGTTTCTATTCATTTATATCTTAGAATGAAAAAATTAAGTATATTAATAAAGTTTAT
GTGGATACTTACAGTACTAGTTTTAGGGCCTCTAGGAATATGGTTTTATATAATATCTTATATAAATTCTCCTTGGATAA
AGATTAACGAAAAGATCGTGTATCTCAGGTCTTTATGGAAACAAACCTCTGTAGCAACTTTATCTGGGCTAGCATTTGGA
GCTTCTAGCATAATTGTAGTAAATTATATATTAACGTATATAGGGTCACCATTAATTTCTTTCTATGCTAGATATGGGGG
TTATTTATTAGGTAATCCTATGATAATAAAAATGATAATATCCTACTTAATAGCTTTTTTATTAGATTTATTTGTTTTTA
TGCCTACTATATTAATAGAAATGAAGAGTAGCAAATATAAAGATGCGGTAAAAGAATCATTACTTTTAGTTTTTATTTCT
ATTACATCAATTTCAGTTGGAATGATGCTAAGTATGTGGTGGTTTAATATGCCTTATTCTCCTAGCATGCTTCGTGAAGA
TAATATACTATGGTTTGGCTTTATGTTTTTATCAGCATTCATAGGATTTTTAATCGCATATATTCCTAATTGGATTTTAG
TTAGAAATGGTAAGAAAATGGGTACTTTATAA

Upstream 100 bases:

>100_bases
ATGAAATCTTCTCATACTTTGACGTATTAATTTTAAATAAAAAGGAAATATTAATACATAGTTATATTTATTTAATAAGT
AGTAATGGAGGGGATCTTAC

Downstream 100 bases:

>100_bases
TAAATTATTTTTCTTTACTAAAAATTTATAGGTATGAAAAAGAGGTGATAGATTGATTATAAATGAAAATTTAAATAAAA
TATATAAAATAGTTTTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; ArsR Type Transcriptional Regulator; Cell-Surface Protein; Lipoprotein

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MKKLSTGIAVFLCAILILGQIRIVKNVIFPSEIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYEGKPNGLI
IYKGDNWKDILALMPLVKKYNSTIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN
YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGVPLYLNNEKKLYNSSKKILPSISKIYVIGKKNN
ADEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEEPLMALVGSQLALKGKVGPIL
WTNKNYLSPLTESYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL
ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYIISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG
ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS
ITSISVGMMLSMWWFNMPYSPSMLREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL

Sequences:

>Translated_623_residues
MKKLSTGIAVFLCAILILGQIRIVKNVIFPSEIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYEGKPNGLI
IYKGDNWKDILALMPLVKKYNSTIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN
YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGVPLYLNNEKKLYNSSKKILPSISKIYVIGKKNN
ADEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEEPLMALVGSQLALKGKVGPIL
WTNKNYLSPLTESYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL
ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYIISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG
ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS
ITSISVGMMLSMWWFNMPYSPSMLREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL
>Mature_623_residues
MKKLSTGIAVFLCAILILGQIRIVKNVIFPSEIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYEGKPNGLI
IYKGDNWKDILALMPLVKKYNSTIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN
YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGVPLYLNNEKKLYNSSKKILPSISKIYVIGKKNN
ADEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEEPLMALVGSQLALKGKVGPIL
WTNKNYLSPLTESYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL
ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYIISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG
ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS
ITSISVGMMLSMWWFNMPYSPSMLREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70848; Mature: 70848

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSTGIAVFLCAILILGQIRIVKNVIFPSEIKHENNRIHLNTGNTIRVSGKSSKEIGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCEEEECCCCCHHHCC
KVTDILFPAFNYEGKPNGLIIYKGDNWKDILALMPLVKKYNSTIIPFNEKDESSLLDYIN
HHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
KLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNINYKDTNSLLEKVYNSVFSNSE
HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KCYGYIVSDEDPLMTVPVATWIVQNGGVPLYLNNEKKLYNSSKKILPSISKIYVIGKKNN
CEEEEEECCCCCEEEEEHEEEEEECCCEEEEECCCHHHHCCCHHHCCCCEEEEEEECCCC
ADEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEE
CHHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC
PLMALVGSQLALKGKVGPILWTNKNYLSPLTESYLWRMKPNYWVTAAEGPYNSLWVMGNE
CHHHHHCCCCEECCCCCCEEECCCCCCCHHHHHHHEEECCCEEEEECCCCCCEEEEECCC
DILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSLISILGAIWVSIHLYLRMKKL
CCCCEEHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILIKFMWILTVLVLGPLGIWFYIISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIE
CCHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKSSKYKDAVKESLLLVFISITSISVGMMLSMWWFNMPYSPSMLREDNILWFGFMFLSAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHHH
IGFLIAYIPNWILVRNGKKMGTL
HHHHHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure
MKKLSTGIAVFLCAILILGQIRIVKNVIFPSEIKHENNRIHLNTGNTIRVSGKSSKEIGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCEEEECCCCCHHHCC
KVTDILFPAFNYEGKPNGLIIYKGDNWKDILALMPLVKKYNSTIIPFNEKDESSLLDYIN
HHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHH
KLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNINYKDTNSLLEKVYNSVFSNSE
HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KCYGYIVSDEDPLMTVPVATWIVQNGGVPLYLNNEKKLYNSSKKILPSISKIYVIGKKNN
CEEEEEECCCCCEEEEEHEEEEEECCCEEEEECCCHHHHCCCHHHCCCCEEEEEEECCCC
ADEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEE
CHHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC
PLMALVGSQLALKGKVGPILWTNKNYLSPLTESYLWRMKPNYWVTAAEGPYNSLWVMGNE
CHHHHHCCCCEECCCCCCEEECCCCCCCHHHHHHHEEECCCEEEEECCCCCCEEEEECCC
DILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSLISILGAIWVSIHLYLRMKKL
CCCCEEHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILIKFMWILTVLVLGPLGIWFYIISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIE
CCHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKSSKYKDAVKESLLLVFISITSISVGMMLSMWWFNMPYSPSMLREDNILWFGFMFLSAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHHH
IGFLIAYIPNWILVRNGKKMGTL
HHHHHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA