Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755167

Identifier: 170755167

GI number: 170755167

Start: 1511204

End: 1511845

Strand: Direct

Name: 170755167

Synonym: CLD_3188

Alternate gene names: NA

Gene position: 1511204-1511845 (Clockwise)

Preceding gene: 170754506

Following gene: 170756427

Centisome position: 38.18

GC content: 28.5

Gene sequence:

>642_bases
ATGGATAAAAATGTTGCATGGTATATTAAAAAACAGGTTGAAAGAACTATAAAGAATCTAAATAGCCGAAATATGGAGGG
ATATTATATTAATAATATAGATCAATTACTTCAAAAATTAAAGGAGCTTCTACCAGAAGGTTCAATAGTTGGCGTAGGAG
ATTCAATGACTCTTTTTGAAACTGGGGTAATAGATTTTTTAAGAAGTAAAAACTTTAATTTTTTAGATAAATATCAAGAT
AAGCTTACAAATGATGAAAAAAGAGATATATATATTAAGAATTTTTCTGCAGATACTTTTATTTGTAGTACTAATGCAAT
AACTGAAAGTGGAGAACTGTACAATGTAGATGGAAATGGAAGTAGAGTTGCACCAATGATATATGGACCCAAACAGGTTA
TTCTTATAGTTGGAATAAATAAAATTGTTAAAAATATAGAAGAGGCTGAAATTAGAGTAAGAAGCTATGCTGCTCCTATT
GATGCAAAAAGATTAAATAGAGATACCCCATGTACACAATTGGGCTATTGTGTTGATTGTAAAAGCCCAAATAGAATCTG
TAATGATTTTGTTGTAATTAAGGGACAGTTTATTAAAGGGAGAATAAAAGTATTAATCCTTGGAGAAAATTTAGGTTATT
AA

Upstream 100 bases:

>100_bases
TTGCAATGTTTTAAAATAAAGTTGATTAAATTTATATTATAGAGATATATGCAAGATTGGCTTATTTATCTGGAACTTTA
ATTTTAGGAGTGATAGGAAT

Downstream 100 bases:

>100_bases
ATTATTTACTTATAAATTAAAAGTATATAGTAATATAAAGTAATCATATTTAAATATGCTATAAGAGAATTAGGTTGTAA
ATAATGTGGAGTTTGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDKNVAWYIKKQVERTIKNLNSRNMEGYYINNIDQLLQKLKELLPEGSIVGVGDSMTLFETGVIDFLRSKNFNFLDKYQD
KLTNDEKRDIYIKNFSADTFICSTNAITESGELYNVDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI
DAKRLNRDTPCTQLGYCVDCKSPNRICNDFVVIKGQFIKGRIKVLILGENLGY

Sequences:

>Translated_213_residues
MDKNVAWYIKKQVERTIKNLNSRNMEGYYINNIDQLLQKLKELLPEGSIVGVGDSMTLFETGVIDFLRSKNFNFLDKYQD
KLTNDEKRDIYIKNFSADTFICSTNAITESGELYNVDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI
DAKRLNRDTPCTQLGYCVDCKSPNRICNDFVVIKGQFIKGRIKVLILGENLGY
>Mature_213_residues
MDKNVAWYIKKQVERTIKNLNSRNMEGYYINNIDQLLQKLKELLPEGSIVGVGDSMTLFETGVIDFLRSKNFNFLDKYQD
KLTNDEKRDIYIKNFSADTFICSTNAITESGELYNVDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPI
DAKRLNRDTPCTQLGYCVDCKSPNRICNDFVVIKGQFIKGRIKVLILGENLGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24234; Mature: 24234

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNVAWYIKKQVERTIKNLNSRNMEGYYINNIDQLLQKLKELLPEGSIVGVGDSMTLFE
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCCEEECCCCCHHHH
TGVIDFLRSKNFNFLDKYQDKLTNDEKRDIYIKNFSADTFICSTNAITESGELYNVDGNG
HHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC
SRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPIDAKRLNRDTPCTQLGYCVDC
CEEEEEEECCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEC
KSPNRICNDFVVIKGQFIKGRIKVLILGENLGY
CCCCHHHCCEEEEEEEEEECEEEEEEEECCCCC
>Mature Secondary Structure
MDKNVAWYIKKQVERTIKNLNSRNMEGYYINNIDQLLQKLKELLPEGSIVGVGDSMTLFE
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCCEEECCCCCHHHH
TGVIDFLRSKNFNFLDKYQDKLTNDEKRDIYIKNFSADTFICSTNAITESGELYNVDGNG
HHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC
SRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPIDAKRLNRDTPCTQLGYCVDC
CEEEEEEECCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEC
KSPNRICNDFVVIKGQFIKGRIKVLILGENLGY
CCCCHHHCCEEEEEEEEEECEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA