| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756393
Identifier: 170756393
GI number: 170756393
Start: 936312
End: 936560
Strand: Direct
Name: 170756393
Synonym: CLD_3747
Alternate gene names: NA
Gene position: 936312-936560 (Clockwise)
Preceding gene: 170756953
Following gene: 170754838
Centisome position: 23.65
GC content: 30.92
Gene sequence:
>249_bases ATGCAAGATAAAGATATGATGAATGATACGCTATCAATGTTAAAAGCTAGCTTAACAGGATATTCTACTACAATTGCTGA AACAGATAATCAACAATTAAGACAAGAGATTCAACAAATGAGAAATAGTTGTGAAACAAGTCAATATGATTTTTATAATG TAGCAAAACAAAAAGGTTTTTACAAACCAGCAGCACAAGCTTCACCACAGCAAATTCAAACAGTAAAAAGCCAAGTAAGT GGTTCATAA
Upstream 100 bases:
>100_bases ATCAACAAATAAAACAAATGTTCCAAAAATCAGCACAGGATGCTCAAAATACAAAACAAAAATTAATGACTTTTTTAGGA TAGTTTAAGGAGGTATAGTC
Downstream 100 bases:
>100_bases AATATAGTTAAAATCAATAAGGAAAATAAATGAATCATAAAATATAGTTAAAGTCAATAAGGAAAATAAGTAAATCATAA AATTTAGTTAAAGCTAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Coat Protein F; Coat F Domain-Containing Protein; Spore Coat Protein F-Related Protein
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MQDKDMMNDTLSMLKASLTGYSTTIAETDNQQLRQEIQQMRNSCETSQYDFYNVAKQKGFYKPAAQASPQQIQTVKSQVS GS
Sequences:
>Translated_82_residues MQDKDMMNDTLSMLKASLTGYSTTIAETDNQQLRQEIQQMRNSCETSQYDFYNVAKQKGFYKPAAQASPQQIQTVKSQVS GS >Mature_82_residues MQDKDMMNDTLSMLKASLTGYSTTIAETDNQQLRQEIQQMRNSCETSQYDFYNVAKQKGFYKPAAQASPQQIQTVKSQVS GS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9263; Mature: 9263
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKDMMNDTLSMLKASLTGYSTTIAETDNQQLRQEIQQMRNSCETSQYDFYNVAKQKGF CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC YKPAAQASPQQIQTVKSQVSGS CCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQDKDMMNDTLSMLKASLTGYSTTIAETDNQQLRQEIQQMRNSCETSQYDFYNVAKQKGF CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC YKPAAQASPQQIQTVKSQVSGS CCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA