| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754838
Identifier: 170754838
GI number: 170754838
Start: 937129
End: 938478
Strand: Direct
Name: 170754838
Synonym: CLD_3746
Alternate gene names: NA
Gene position: 937129-938478 (Clockwise)
Preceding gene: 170756393
Following gene: 170755668
Centisome position: 23.68
GC content: 26.22
Gene sequence:
>1350_bases ATGAAAAAAAATAAAATTTTAATAGTTGTTTTTCTTTGTTTTTTAATAGGCGGCAGTGTTTATTTTTTTGTAGGAGCTAA AGAGAATGAGGCACAGGTTAAAGAAAATAGCAAAAAAGATGAGCAGAAGATGAAAGAAGAGAAATATTCCAAGTTTTCAG GGCTAAATTTAAGTAAGGCGGATATTAAATTAAAATATAAAGATAAAATATTAAATTTAAAATTACCAATATACATGGAT AAAAACAGATACTATGTTCCAGTTAATAATGTTTTAGACCAAATTGGTGTGAATTATATAATAAAAGAGGGTAAGGTTCA TACAGAAATCAATAATAAAAAGATAGATATTCATAAAAATTTGGCTAATATTTCTGAGAAAAAATATAAGCTTAGAAAAG ATACAATTTTAAAAGAAGATATAATGTATATGTCTCTATTTGATTTTAATAAGATAGTAGGATTAAAAGCAAACTGGAAT GAAACTGAAAAAACAATAAGTTTATATAAAAATAAAGAACAAGAAAAAGTAGTAAATAATAAGAATTCTGAGAAAAAGCC AGCTTTTGTAAGGCTTGAGGATATAACATCTAATCAAAGATATAAAACTCCAGAGGCATTAGAAAAATTAAGAGTAATAT CAGATTATTTATACTCCCGAAATATACCTTTTCATGTAGCATGGGTTCCAAGATATTTAGATCCTAAAAATAATATAGAT GATGATGCATCTAGAGATTTTAATATACATAATGCTAATTTTGTGTATACTTTAGACTACTTTATCGATAGAGGAGGTAT TATAGGGCTTCATGGATATACTCATCAATCAGGGGTGGAAGTAAGCATAGATGGTATAGAATTTGATGAAACAAGAAATA ACGATGAATCCACTATAAGAGAAAGAGTTCAAAAAGCTATTCAATGTGCAAAGACTTTAGATATACCTATAGGATTTTTT GAAAGTGCTCATTATTCAGCCACAAATGAAGAAACTAAGATAATAGAACAATATTTTAATTATATGTATGATCCACCTAA ATTTGCATCTAGAAATAACATTGCTAAAAGACAATCAAAGGATAGAACTGTCACTTATATACCAACTCCATTAGATTATG TTGATGGTATAAAGCATGCGGATAAAGTTATAGAAAATATTAATAATTTAGATGAAGGTACATTAGGTAGCTTTTTCTAT CATCCTAGCATAGAATCCAGTTTTATAAAATTTAAAACTAATAAAGATGGATCAGTAGAATATACTTATGAAGACAATTC ACCTTTAAAAAAGATAATAAAAGCCTTTGAAAAAAATAATTATGAGTTTAAGAAAATAACAGAGTTTTAA
Upstream 100 bases:
>100_bases TTCTATACAGAGTTAAGCTTTGTGTAAAAATCATATAATTATGAACTAAAAAATATATATTATAATTTTTTACATTATAA CACCTTAAGGAGAATGCAGT
Downstream 100 bases:
>100_bases AAAATATAAATATGTCGTTGAAAATATTACTGAAAATTAATTTTTTCAGTAATATTTTTTTATAACAAATTTTACAAATA AAAAATCGATATCTATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKKNKILIVVFLCFLIGGSVYFFVGAKENEAQVKENSKKDEQKMKEEKYSKFSGLNLSKADIKLKYKDKILNLKLPIYMD KNRYYVPVNNVLDQIGVNYIIKEGKVHTEINNKKIDIHKNLANISEKKYKLRKDTILKEDIMYMSLFDFNKIVGLKANWN ETEKTISLYKNKEQEKVVNNKNSEKKPAFVRLEDITSNQRYKTPEALEKLRVISDYLYSRNIPFHVAWVPRYLDPKNNID DDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGVEVSIDGIEFDETRNNDESTIRERVQKAIQCAKTLDIPIGFF ESAHYSATNEETKIIEQYFNYMYDPPKFASRNNIAKRQSKDRTVTYIPTPLDYVDGIKHADKVIENINNLDEGTLGSFFY HPSIESSFIKFKTNKDGSVEYTYEDNSPLKKIIKAFEKNNYEFKKITEF
Sequences:
>Translated_449_residues MKKNKILIVVFLCFLIGGSVYFFVGAKENEAQVKENSKKDEQKMKEEKYSKFSGLNLSKADIKLKYKDKILNLKLPIYMD KNRYYVPVNNVLDQIGVNYIIKEGKVHTEINNKKIDIHKNLANISEKKYKLRKDTILKEDIMYMSLFDFNKIVGLKANWN ETEKTISLYKNKEQEKVVNNKNSEKKPAFVRLEDITSNQRYKTPEALEKLRVISDYLYSRNIPFHVAWVPRYLDPKNNID DDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGVEVSIDGIEFDETRNNDESTIRERVQKAIQCAKTLDIPIGFF ESAHYSATNEETKIIEQYFNYMYDPPKFASRNNIAKRQSKDRTVTYIPTPLDYVDGIKHADKVIENINNLDEGTLGSFFY HPSIESSFIKFKTNKDGSVEYTYEDNSPLKKIIKAFEKNNYEFKKITEF >Mature_449_residues MKKNKILIVVFLCFLIGGSVYFFVGAKENEAQVKENSKKDEQKMKEEKYSKFSGLNLSKADIKLKYKDKILNLKLPIYMD KNRYYVPVNNVLDQIGVNYIIKEGKVHTEINNKKIDIHKNLANISEKKYKLRKDTILKEDIMYMSLFDFNKIVGLKANWN ETEKTISLYKNKEQEKVVNNKNSEKKPAFVRLEDITSNQRYKTPEALEKLRVISDYLYSRNIPFHVAWVPRYLDPKNNID DDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGVEVSIDGIEFDETRNNDESTIRERVQKAIQCAKTLDIPIGFF ESAHYSATNEETKIIEQYFNYMYDPPKFASRNNIAKRQSKDRTVTYIPTPLDYVDGIKHADKVIENINNLDEGTLGSFFY HPSIESSFIKFKTNKDGSVEYTYEDNSPLKKIIKAFEKNNYEFKKITEF
Specific function: Unknown
COG id: COG5298
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52487; Mature: 52487
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKILIVVFLCFLIGGSVYFFVGAKENEAQVKENSKKDEQKMKEEKYSKFSGLNLSKA CCCCCEEHHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC DIKLKYKDKILNLKLPIYMDKNRYYVPVNNVLDQIGVNYIIKEGKVHTEINNKKIDIHKN EEEEEEECEEEEEEEEEEECCCEEEEEHHHHHHHCCCEEEEECCEEEEEECCCEEEEHHH LANISEKKYKLRKDTILKEDIMYMSLFDFNKIVGLKANWNETEKTISLYKNKEQEKVVNN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHCC KNSEKKPAFVRLEDITSNQRYKTPEALEKLRVISDYLYSRNIPFHVAWVPRYLDPKNNID CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC DDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGVEVSIDGIEFDETRNNDESTIR CCCCCCCCEECCCEEEEEEHEECCCCEEEECCCCCCCCCEEEECCEEECCCCCCCHHHHH ERVQKAIQCAKTLDIPIGFFESAHYSATNEETKIIEQYFNYMYDPPKFASRNNIAKRQSK HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC DRTVTYIPTPLDYVDGIKHADKVIENINNLDEGTLGSFFYHPSIESSFIKFKTNKDGSVE CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEECCCCCEE YTYEDNSPLKKIIKAFEKNNYEFKKITEF EEECCCCHHHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure MKKNKILIVVFLCFLIGGSVYFFVGAKENEAQVKENSKKDEQKMKEEKYSKFSGLNLSKA CCCCCEEHHHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC DIKLKYKDKILNLKLPIYMDKNRYYVPVNNVLDQIGVNYIIKEGKVHTEINNKKIDIHKN EEEEEEECEEEEEEEEEEECCCEEEEEHHHHHHHCCCEEEEECCEEEEEECCCEEEEHHH LANISEKKYKLRKDTILKEDIMYMSLFDFNKIVGLKANWNETEKTISLYKNKEQEKVVNN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHCC KNSEKKPAFVRLEDITSNQRYKTPEALEKLRVISDYLYSRNIPFHVAWVPRYLDPKNNID CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC DDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGVEVSIDGIEFDETRNNDESTIR CCCCCCCCEECCCEEEEEEHEECCCCEEEECCCCCCCCCEEEECCEEECCCCCCCHHHHH ERVQKAIQCAKTLDIPIGFFESAHYSATNEETKIIEQYFNYMYDPPKFASRNNIAKRQSK HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC DRTVTYIPTPLDYVDGIKHADKVIENINNLDEGTLGSFFYHPSIESSFIKFKTNKDGSVE CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEECCCCCEE YTYEDNSPLKKIIKAFEKNNYEFKKITEF EEECCCCHHHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA