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The map label for this gene is 170756353

Identifier: 170756353

GI number: 170756353

Start: 2331731

End: 2332210

Strand: Reverse

Name: 170756353

Synonym: CLD_2438

Alternate gene names: NA

Gene position: 2332210-2331731 (Counterclockwise)

Preceding gene: 170757089

Following gene: 170755296

Centisome position: 58.92

GC content: 25.21

Gene sequence:

>480_bases
TTGTTACAGATACCCCTTAAAAACGTTACAGAGATTACTAAAAAAGAGGTGATTAGCATAGATAATTATAAAAAAACTGA
ACATATGTTATATAATTATAAAAACATGAAAGCAGAAATTAAGAACATATTAATTGAAATAGAAGATATAGAAAACTCAT
ACCGAGGTATAGGAGCTATGCAATATTCAGATATGCCAAAAGCTCACAATACTAACAGTGCAATTGAGCAAGAAGTAGAA
CAGAAAGAAAAGAAAATTGAACATTTAAATAGATTAATAACTAAAAAAGAAAATATTATAAAACGTATTGATAATGCTTT
AGAAGCTTTAACTGAGAGAGAACGTAAATTAATAGAACTTAGATACTTTAATAAAATACCTAATAATAGAGTTGCTGAAA
AATTAGACTTAGCAGAGCAAACAACATCTATTATGAATAAAAAGATAATAGATAAATTGTCTACATTAATGTTCTTTTAA

Upstream 100 bases:

>100_bases
TTTAATATAACTTATTATATATAATAAAGAAATTATTATATATATGTAACGCTTTTTCTGTAACAAAATTACTTCAAAGC
TACTAATATAGCCAAAGTAG

Downstream 100 bases:

>100_bases
TAAAATATTAATTTGTGATTAAGTCATAATTAATTTAATATGTTATAATGTTATTATACGGAGTACCCAGAGAAAGGGTA
CTCTTTTTTAATATGTGTAG

Product: sigma factor

Products: NA

Alternate protein names: Sigma Factor

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLQIPLKNVTEITKKEVISIDNYKKTEHMLYNYKNMKAEIKNILIEIEDIENSYRGIGAMQYSDMPKAHNTNSAIEQEVE
QKEKKIEHLNRLITKKENIIKRIDNALEALTERERKLIELRYFNKIPNNRVAEKLDLAEQTTSIMNKKIIDKLSTLMFF

Sequences:

>Translated_159_residues
MLQIPLKNVTEITKKEVISIDNYKKTEHMLYNYKNMKAEIKNILIEIEDIENSYRGIGAMQYSDMPKAHNTNSAIEQEVE
QKEKKIEHLNRLITKKENIIKRIDNALEALTERERKLIELRYFNKIPNNRVAEKLDLAEQTTSIMNKKIIDKLSTLMFF
>Mature_159_residues
MLQIPLKNVTEITKKEVISIDNYKKTEHMLYNYKNMKAEIKNILIEIEDIENSYRGIGAMQYSDMPKAHNTNSAIEQEVE
QKEKKIEHLNRLITKKENIIKRIDNALEALTERERKLIELRYFNKIPNNRVAEKLDLAEQTTSIMNKKIIDKLSTLMFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18813; Mature: 18813

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIPLKNVTEITKKEVISIDNYKKTEHMLYNYKNMKAEIKNILIEIEDIENSYRGIGAM
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QYSDMPKAHNTNSAIEQEVEQKEKKIEHLNRLITKKENIIKRIDNALEALTERERKLIEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYFNKIPNNRVAEKLDLAEQTTSIMNKKIIDKLSTLMFF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQIPLKNVTEITKKEVISIDNYKKTEHMLYNYKNMKAEIKNILIEIEDIENSYRGIGAM
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QYSDMPKAHNTNSAIEQEVEQKEKKIEHLNRLITKKENIIKRIDNALEALTERERKLIEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYFNKIPNNRVAEKLDLAEQTTSIMNKKIIDKLSTLMFF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA