| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755296
Identifier: 170755296
GI number: 170755296
Start: 2331195
End: 2331611
Strand: Reverse
Name: 170755296
Synonym: CLD_2439
Alternate gene names: NA
Gene position: 2331611-2331195 (Counterclockwise)
Preceding gene: 170756353
Following gene: 170755399
Centisome position: 58.91
GC content: 35.25
Gene sequence:
>417_bases ATGGCTTATGATGTACTAACAGTAAAGCAAAGTGATATGGTTACAATGCTTATAGAAGGCGAGAATATAACGGATATAGC TAAGAAGTTAAATGTAACAAGGAATACGATATATGCGTGGATGAATAAGGATAATGTTAAGGCTGAGCTGGACAGACGTA AGCGAGAGCTTGCAACCCAAGGTAACCAGATGATACTTAAGGATCTAACCACCTATATAGATAACATTAAGACCTTGGCT AATGATAGCAGTGATAAGCGTGTGAGCCTAGCAGCTAACCAGTATCTACTTAATAGAATATATGGTAATCCTACTAGTGT AGTGGAGGATAATACTGAGAATAACAATGATAATATAGATACTAATGCATTGGAACAAGAGTTAAATAAGTATAGTAACA TACGTAGAGTTAAGTAA
Upstream 100 bases:
>100_bases TAAGTCATAATTAATTTAATATGTTATAATGTTATTATACGGAGTACCCAGAGAAAGGGTACTCTTTTTTAATATGTGTA GTTGCCAAGGAGGTGAGTGT
Downstream 100 bases:
>100_bases TATCAACGCTTGTAGCTGTTTCAAATATATTCGCAAAAATTTCATTTAGCGAAGTTGTGATATAAGGGGGTGGTTCTAAA ATATGGATGTGTGAAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAYDVLTVKQSDMVTMLIEGENITDIAKKLNVTRNTIYAWMNKDNVKAELDRRKRELATQGNQMILKDLTTYIDNIKTLA NDSSDKRVSLAANQYLLNRIYGNPTSVVEDNTENNNDNIDTNALEQELNKYSNIRRVK
Sequences:
>Translated_138_residues MAYDVLTVKQSDMVTMLIEGENITDIAKKLNVTRNTIYAWMNKDNVKAELDRRKRELATQGNQMILKDLTTYIDNIKTLA NDSSDKRVSLAANQYLLNRIYGNPTSVVEDNTENNNDNIDTNALEQELNKYSNIRRVK >Mature_137_residues AYDVLTVKQSDMVTMLIEGENITDIAKKLNVTRNTIYAWMNKDNVKAELDRRKRELATQGNQMILKDLTTYIDNIKTLAN DSSDKRVSLAANQYLLNRIYGNPTSVVEDNTENNNDNIDTNALEQELNKYSNIRRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15860; Mature: 15729
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDVLTVKQSDMVTMLIEGENITDIAKKLNVTRNTIYAWMNKDNVKAELDRRKRELATQ CCCEEEEECCCCEEEEEEECCCHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHC GNQMILKDLTTYIDNIKTLANDSSDKRVSLAANQYLLNRIYGNPTSVVEDNTENNNDNID CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TNALEQELNKYSNIRRVK HHHHHHHHHHHHHHCCCC >Mature Secondary Structure AYDVLTVKQSDMVTMLIEGENITDIAKKLNVTRNTIYAWMNKDNVKAELDRRKRELATQ CCEEEEECCCCEEEEEEECCCHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHC GNQMILKDLTTYIDNIKTLANDSSDKRVSLAANQYLLNRIYGNPTSVVEDNTENNNDNID CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TNALEQELNKYSNIRRVK HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA