Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756300

Identifier: 170756300

GI number: 170756300

Start: 2675890

End: 2676474

Strand: Reverse

Name: 170756300

Synonym: CLD_2077

Alternate gene names: NA

Gene position: 2676474-2675890 (Counterclockwise)

Preceding gene: 170755472

Following gene: 170754798

Centisome position: 67.62

GC content: 23.93

Gene sequence:

>585_bases
TTGAATATAGATAAAATAAAAAAATTAGAAGATTTAAATAAAGAATTATCAAAACTTCAACAGCAGAGAAATAGAAATTT
CGAAAAAGCCAAAGTTAATTTTTTTGAAAATAATATTCAAAAGTTTAAGGACTTTTTTATAAAACAAGGATTTGCTGTTA
CAGAAAGCAGCAAAGTAGACAGAGAGGGGTATAATAATAAAGTTATAAGTGCAATATATAATAATTTTAAAATTGATGTT
GCTATTCCACCTATAGACATTTCATATATGGGTGCATATTCAGTATGGGAGTTAAATGTATATAAAGATGATGTAAAATA
TTCTCTTATGGTTAATGAACTAGGGCATAAGCCATCTATTAGAACTAGTTTTACTTCATCTATAAATAAAACATTAACAG
AAGATGAAAAAATGGAAAATGAAATAATAGAAACAAAAGAAACAATAACTATGCTAAAGGAAGAATTAGAATCAAATGAA
AAAACAGATTTTGGATTTACTTTAGTAAAGGAAGAAAAAGAAAGAAAATTTTGTGATACACAGTTTAAGTCAATGAATGA
TTTATTGAAAACTTTATTTAATTAA

Upstream 100 bases:

>100_bases
ACTTGGAATACAGTAGATATTAAAAATAATGGGAAAATATAAAATAAAATACAATTTTATGTTATAATTTAGATAGAATA
ATATAAAGGAGGTATTGAAA

Downstream 100 bases:

>100_bases
CATATTTCAACTTAAAAAAGAACCTACTTATTAAATGTGGGTTCTTTTTTTATTATAATTTTGGAGGTGTAATGTGGAAT
TAAAAGTCTGCGAGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV
AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE
KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN

Sequences:

>Translated_194_residues
MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV
AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE
KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN
>Mature_194_residues
MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV
AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE
KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22850; Mature: 22850

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
REGYNNKVISAIYNNFKIDVAIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSI
CCCCCCHHHHHHHCCEEEEEEECCCCEEECCCEEEEEEEEECCCHHHHHHHHHHCCCCCC
RTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNEKTDFGFTLVKEEKERKFCDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHH
QFKSMNDLLKTLFN
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
REGYNNKVISAIYNNFKIDVAIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSI
CCCCCCHHHHHHHCCEEEEEEECCCCEEECCCEEEEEEEEECCCHHHHHHHHHHCCCCCC
RTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNEKTDFGFTLVKEEKERKFCDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHH
QFKSMNDLLKTLFN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA