| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754798
Identifier: 170754798
GI number: 170754798
Start: 2675562
End: 2675816
Strand: Reverse
Name: 170754798
Synonym: CLD_2078
Alternate gene names: NA
Gene position: 2675816-2675562 (Counterclockwise)
Preceding gene: 170756300
Following gene: 170755627
Centisome position: 67.6
GC content: 29.8
Gene sequence:
>255_bases GTGGAATTAAAAGTCTGCGAGGAAAAACATAAAAGGATAGAAGAAAAAATTAATGTTCAAGATATTAGACTTAACGATCA TGGAAAAAGAATTGATAAAATAGAACAAAGCCAATCTAGGACAGATACTAAGATTGAGAATCTTTGTGACCAGTTAAAAC AACTTGTAGGTATTATGAAGTGGTATGTAGGATTAACAGTAGGAGCTTTAGTAAGCTTCTTTTTTTATGCAATTCAACAC AATATTTTTAGATAG
Upstream 100 bases:
>100_bases GATTTATTGAAAACTTTATTTAATTAACATATTTCAACTTAAAAAAGAACCTACTTATTAAATGTGGGTTCTTTTTTTAT TATAATTTTGGAGGTGTAAT
Downstream 100 bases:
>100_bases AAAGGTAGGTGATTATATGAAGTTTTTAGAGCAATTCTTACAGATAAAAAAGATTATAGCATTATTAACTACTATAGTAT TTTGCATTTTAGCATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MELKVCEEKHKRIEEKINVQDIRLNDHGKRIDKIEQSQSRTDTKIENLCDQLKQLVGIMKWYVGLTVGALVSFFFYAIQH NIFR
Sequences:
>Translated_84_residues MELKVCEEKHKRIEEKINVQDIRLNDHGKRIDKIEQSQSRTDTKIENLCDQLKQLVGIMKWYVGLTVGALVSFFFYAIQH NIFR >Mature_84_residues MELKVCEEKHKRIEEKINVQDIRLNDHGKRIDKIEQSQSRTDTKIENLCDQLKQLVGIMKWYVGLTVGALVSFFFYAIQH NIFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9979; Mature: 9979
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKVCEEKHKRIEEKINVQDIRLNDHGKRIDKIEQSQSRTDTKIENLCDQLKQLVGIMK CCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WYVGLTVGALVSFFFYAIQHNIFR HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELKVCEEKHKRIEEKINVQDIRLNDHGKRIDKIEQSQSRTDTKIENLCDQLKQLVGIMK CCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WYVGLTVGALVSFFFYAIQHNIFR HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA