| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756244
Identifier: 170756244
GI number: 170756244
Start: 2270343
End: 2272964
Strand: Reverse
Name: 170756244
Synonym: CLD_2504
Alternate gene names: NA
Gene position: 2272964-2270343 (Counterclockwise)
Preceding gene: 170755192
Following gene: 170757294
Centisome position: 57.42
GC content: 33.3
Gene sequence:
>2622_bases ATGAAATCTAAGAAATTAAAATTATCATTGTTATTGGGTGCTTATGCATTGTGTTCAATGTTATTAGCAAGGCCTGTCAA AGCAGATGTTGGAGTTGTTCAGGGTGCTACACCTATTAATCAAGGTATGGCTATTCACGCAGACGACTTTACAATATACA ATGATAAAATTGCTGCATCTTTTGCAGTAGGAACAAATAACTACTGGAACATGACAAATGGAAGTATCCTTGACGTTGCT ATTATGAAAGATGGCAAATTTGGTGTTGATTTAGTAAATGATATTGAATTTCTAAACAATTACTGGACAGCTACAGGAGC ATTTAACGGTGAAAATCTACAGAAAAATCCAAAGGAAAATATTACATACAAAAAAGAAGAGAATAAGGTTGTTGTTACTG CTAAAACAAGATATTGGACAGCAGGACATAAATTACCTTTAAATGTCACAATTCAGTATACATTAGAAGATGGTAAAAAT TATATTGGTTTAAAAACAACTGTTGAAAATCCAAAAGGAAATGATGTTTATGAAAACATGTATGGAGGATATTCAATTAG TACTTTAGCTGCTAGCACTTTTGGACCTTTTGGATATTATCCTGACAAGAAAATAACTGGTATCGGAATTGGTGCTGATA AAGATGTTAATGAAAGATTTGGAAATTACGTTGTAACTTATGATAAAAATTATGCTGTTTCCGTTCAATTAGATGGGGCA AATACATATAAAGGGTCAAGTGGATATAAGGATGTCTATGTAAATAATACAATTGAACCAGGAAAGAGCTGTATTTATAC AGGTGAAATTTTAGTTTCAGATAAAGGTGAAACAACACCTATTATTGAACGTTTCATAGAAAAAGATAAAACAATTCAAT CAGCGAATGTAAACGGTGTAGTTAAGGATTCGAAGGGAAATTCTGTAAAGGATGCATTTGTAGTAATCAGTAAAAAAGGT TCTTATAAGGAAACTGTAAAATCTCATGGTAAAGAACAACTTAAAAAAGATATTATGCAGCCATTTGCTTGGAAAATAAC AGATGAAAATGGTCACTTTGAATTTGATTTACCAAAAGATGAATATGAGGTTCATGTTGAAGCTAAAGGATATACACCGT CAGATATTCAGAAGTTAAACCTAACAGAAAGTTCAACCTTAGATTTTATGGTTAAAGATGGAGCTCAAGCTTCTCTTAAA GCTGTTGATGAAAATGGAAATCCAGTTGATTTCAAGGTAACTGTATCAGGAATTACATCAACATTTAAAACACTTGGGGG AACTGTATTCTTTACAGATCCAAAAACACATGAAGCCAAATTTGAGGTATCAGCTCCTGAAAATCCTGTAACGTTTACAA TTACACGTGCCAGTGATTATGAATCACTTCCAGCTACAATAACAAAAACAATAAAGCCGGGTGAAACGCTTAATGAAGAA GTTGTACTTCCTACATTAATAAAAACAAATTCAAGAAATTGGTATAGTATGGACAACCATCAACATGCAGACTTTGGTGA TGGTGCAACACCAGTTAAAGAACTATATAAAGCTCAAGTTGCAGCAGGTTTAAATTATAATCTTGTTTCTGATCATGATG CAGTAGTAAATGATCCTCTTATGGCTGAATTAGCTAAAGAAGGTAACAGACCATTTATTCCAAGTATTGAAGTTTCTCCA GGTTGGGGTCATTGGGGTATTTTAGGTGTTGATTATACAAAGAATCCGATTTCTCCAGACTTAACTCCAGCAGAAATAAT TAAAGCTGGGCATGATATGGGTGCTCTTGTAGTTGTTAATCATCCATATACAGAATATGGTTTCTTCTATAATAGAGATA GCGTTAAAGGTGGATATGATGAAGGTACTGAAGATTTCGATTTACTTGAATTACAATCTACAATTGATTTAACTGATAGT ACTAACATGGATAAAAGAGCATTAGATTCTGCAATGGGATATTGGAATAAAGGTATTAAAAAATACTTAAGTGCAGGTTC AGACCAGCACGATGTAACTTCAGGACTATACCCAGGAATTATCAGATTATATGCTTATATTGAAGGGGAAAATACAACTG AAAAGTATCTTCAAACAATAAAAAATGGTCATAGTTATGTGACAATGGGACCTATATTTACACCAAAAGCAAACACAATG TTTGGTACAACACAAAAAGTTAATGCAGGTGAAAAATACACATTAAATACAGAAATCCAAGCTGTTAATGGATTAAATCA TATTGATGTTTACAGCGAAGGTAAGATTATTGCATCAAAAGACTTTAATAATACACAAGATGCTGTTAACTATACACTAG ATGTAAAACCAACAAAAAACACATGGTATAGTTTTGTTGCAACTGATGGAAAAGGTCACTATGCAGTTACAAATCCTATT TGGGTGGACATTGCAGATGATACTGACAAACCAGGGTCAACAGACAAACCAGGATCAACAGAAAAACCAGGGTCAAATGA AGGGAAAAAAGTAACTACAGCTGGAAAATGGAAACTTCCAAATACTGCTACACATGCATACGGAATATTACTAGCAGGTT CTGTATTAGCACTACTAGGCGCAGGTGGATTTGTATTTAAAAAGCGTCATAAGCATGAGTAA
Upstream 100 bases:
>100_bases CTTATTAACTCAAGTATTAAATAGAAACAAGTTAACTTTGATTGTTAATTTTTAAATTAATATAAAATTTTTTATTATCC GAATTAAGGGGGACATAATT
Downstream 100 bases:
>100_bases ATTTAAGTTATCATTTAAAAAGTTATCATTAGTAAAAATCTTAAGTCTAGGAACTATAGTACTAGGCTTAGGATGTATTT CTTGGTCATTAATTAACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 873; Mature: 873
Protein sequence:
>873_residues MKSKKLKLSLLLGAYALCSMLLARPVKADVGVVQGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIQYTLEDGKN YIGLKTTVENPKGNDVYENMYGGYSISTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFIEKDKTIQSANVNGVVKDSKGNSVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIQKLNLTESSTLDFMVKDGAQASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFEVSAPENPVTFTITRASDYESLPATITKTIKPGETLNEE VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGNRPFIPSIEVSP GWGHWGILGVDYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYAYIEGENTTEKYLQTIKNGHSYVTMGPIFTPKANTM FGTTQKVNAGEKYTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKPGSTDKPGSTEKPGSNEGKKVTTAGKWKLPNTATHAYGILLAGSVLALLGAGGFVFKKRHKHE
Sequences:
>Translated_873_residues MKSKKLKLSLLLGAYALCSMLLARPVKADVGVVQGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIQYTLEDGKN YIGLKTTVENPKGNDVYENMYGGYSISTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFIEKDKTIQSANVNGVVKDSKGNSVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIQKLNLTESSTLDFMVKDGAQASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFEVSAPENPVTFTITRASDYESLPATITKTIKPGETLNEE VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGNRPFIPSIEVSP GWGHWGILGVDYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYAYIEGENTTEKYLQTIKNGHSYVTMGPIFTPKANTM FGTTQKVNAGEKYTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKPGSTDKPGSTEKPGSNEGKKVTTAGKWKLPNTATHAYGILLAGSVLALLGAGGFVFKKRHKHE >Mature_873_residues MKSKKLKLSLLLGAYALCSMLLARPVKADVGVVQGATPINQGMAIHADDFTIYNDKIAASFAVGTNNYWNMTNGSILDVA IMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKENITYKKEENKVVVTAKTRYWTAGHKLPLNVTIQYTLEDGKN YIGLKTTVENPKGNDVYENMYGGYSISTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFIEKDKTIQSANVNGVVKDSKGNSVKDAFVVISKKG SYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKDEYEVHVEAKGYTPSDIQKLNLTESSTLDFMVKDGAQASLK AVDENGNPVDFKVTVSGITSTFKTLGGTVFFTDPKTHEAKFEVSAPENPVTFTITRASDYESLPATITKTIKPGETLNEE VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPLMAELAKEGNRPFIPSIEVSP GWGHWGILGVDYTKNPISPDLTPAEIIKAGHDMGALVVVNHPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDS TNMDKRALDSAMGYWNKGIKKYLSAGSDQHDVTSGLYPGIIRLYAYIEGENTTEKYLQTIKNGHSYVTMGPIFTPKANTM FGTTQKVNAGEKYTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKNTWYSFVATDGKGHYAVTNPI WVDIADDTDKPGSTDKPGSTEKPGSNEGKKVTTAGKWKLPNTATHAYGILLAGSVLALLGAGGFVFKKRHKHE
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95906; Mature: 95906
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKLKLSLLLGAYALCSMLLARPVKADVGVVQGATPINQGMAIHADDFTIYNDKIAAS CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCEEEECCCEEEE FAVGTNNYWNMTNGSILDVAIMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKEN EEECCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC ITYKKEENKVVVTAKTRYWTAGHKLPLNVTIQYTLEDGKNYIGLKTTVENPKGNDVYENM CCEEECCCEEEEEEEEEEEECCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHHH YGGYSISTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA CCCEEEHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCCEEEEEEECCC NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFIEKDKTIQSANVNGV CCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCEE VKDSKGNSVKDAFVVISKKGSYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKD EECCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEECCCC EYEVHVEAKGYTPSDIQKLNLTESSTLDFMVKDGAQASLKAVDENGNPVDFKVTVSGITS CEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECHHHH TFKTLGGTVFFTDPKTHEAKFEVSAPENPVTFTITRASDYESLPATITKTIKPGETLNEE HHHHHCCEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHEEECCCCCCCCCCC VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPL EEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH MAELAKEGNRPFIPSIEVSPGWGHWGILGVDYTKNPISPDLTPAEIIKAGHDMGALVVVN HHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE HPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDSTNMDKRALDSAMGYWNKGIK CCCHHHCEEECCCCCCCCCCCCCCCCEEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHH KYLSAGSDQHDVTSGLYPGIIRLYAYIEGENTTEKYLQTIKNGHSYVTMGPIFTPKANTM HHHHCCCCCCHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEECCEECCCCCCE FGTTQKVNAGEKYTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKN ECCCEECCCCCEEEECCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC TWYSFVATDGKGHYAVTNPIWVDIADDTDKPGSTDKPGSTEKPGSNEGKKVTTAGKWKLP CEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECC NTATHAYGILLAGSVLALLGAGGFVFKKRHKHE CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure MKSKKLKLSLLLGAYALCSMLLARPVKADVGVVQGATPINQGMAIHADDFTIYNDKIAAS CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCEEEECCCEEEE FAVGTNNYWNMTNGSILDVAIMKDGKFGVDLVNDIEFLNNYWTATGAFNGENLQKNPKEN EEECCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC ITYKKEENKVVVTAKTRYWTAGHKLPLNVTIQYTLEDGKNYIGLKTTVENPKGNDVYENM CCEEECCCEEEEEEEEEEEECCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHHH YGGYSISTLAASTFGPFGYYPDKKITGIGIGADKDVNERFGNYVVTYDKNYAVSVQLDGA CCCEEEHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEECCCEEEEEEECCC NTYKGSSGYKDVYVNNTIEPGKSCIYTGEILVSDKGETTPIIERFIEKDKTIQSANVNGV CCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCEE VKDSKGNSVKDAFVVISKKGSYKETVKSHGKEQLKKDIMQPFAWKITDENGHFEFDLPKD EECCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEECCCC EYEVHVEAKGYTPSDIQKLNLTESSTLDFMVKDGAQASLKAVDENGNPVDFKVTVSGITS CEEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECHHHH TFKTLGGTVFFTDPKTHEAKFEVSAPENPVTFTITRASDYESLPATITKTIKPGETLNEE HHHHHCCEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHEEECCCCCCCCCCC VVLPTLIKTNSRNWYSMDNHQHADFGDGATPVKELYKAQVAAGLNYNLVSDHDAVVNDPL EEEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH MAELAKEGNRPFIPSIEVSPGWGHWGILGVDYTKNPISPDLTPAEIIKAGHDMGALVVVN HHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE HPYTEYGFFYNRDSVKGGYDEGTEDFDLLELQSTIDLTDSTNMDKRALDSAMGYWNKGIK CCCHHHCEEECCCCCCCCCCCCCCCCEEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHH KYLSAGSDQHDVTSGLYPGIIRLYAYIEGENTTEKYLQTIKNGHSYVTMGPIFTPKANTM HHHHCCCCCCHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEECCEECCCCCCE FGTTQKVNAGEKYTLNTEIQAVNGLNHIDVYSEGKIIASKDFNNTQDAVNYTLDVKPTKN ECCCEECCCCCEEEECCEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCC TWYSFVATDGKGHYAVTNPIWVDIADDTDKPGSTDKPGSTEKPGSNEGKKVTTAGKWKLP CEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECC NTATHAYGILLAGSVLALLGAGGFVFKKRHKHE CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA