Click here to switch to the map view.

The map label for this gene is 170756162

Identifier: 170756162

GI number: 170756162

Start: 3265840

End: 3266610

Strand: Reverse

Name: 170756162

Synonym: CLD_1529

Alternate gene names: NA

Gene position: 3266610-3265840 (Counterclockwise)

Preceding gene: 170757159

Following gene: 170755384

Centisome position: 82.53

GC content: 31.78

Gene sequence:

>771_bases
ATGTTATTCAGTTTAAATCCAGGACATACATTAAGTGGTGGAGATGTAGGAACTAGAGGAATAAATGGACTAAAAGAAGA
AGTTTTAACAAGGCAGTTAATAGAGGAAATAGATAAAGAATTAAGAGAAAGGGGACATAGAACTAATATATGTAGAGTGG
ACTATGCACCTACATTACAAGAAAGCTTAAATAAACAAGTGGCCTTATGTAATTCAGTAGATGCAGATTTAAATATTTGT
ATACATTTTAATACAACAGTAGGTGGATATGGATCAGAAGTATATACTTATAATGGTAAGTATTTAATAGGGGCAGATAG
AGTATTAAAAGAATTAAACAAACTAGGTTTTAGAAATAGAGGAATTAAAGATCAGCCTTTAGCATTAACCAAAAGGACTA
AAGCAAAAACAATTTATATAGAGGTATGTTTTATAGATAGTGCTGGAGATGTGGCTATACTTAATAAATATGGCATAAAT
GGAATTGCCAAAGCAATAGTAAATGGAGTATTAGGAACATCTTCAAATGTGTCATCTAAGCCAGTTGAAGAAAATACAAG
TACAGGATGGATAAATTTAGATGGGAAAACAGGTACTATATGTACTCCAAGTGGTGTAAATGTTAGAGAAGGGAAATCTA
CAACAAGTAGAATATTGGGAACCCTTCCTAATGGGGCCAAAGTACAATTATATCATAAGGAAGGGGAATGGATGCATGTA
TATTATCCTCCACATGGGGGATATATATATTCTAAATATATAAGATACTAA

Upstream 100 bases:

>100_bases
ATAATTTTTTATTTCCAATTCAGTTATACAAATGATTATAGAAATTATCATTATTATTTAGTTAAAAAATATAATAAAAA
ACACAGGAGGTAATCTTAAT

Downstream 100 bases:

>100_bases
CTAAGTTAGTATCTTATATTAAATTTTTATGCTAAATGCTAAAAATATCATTGTTTCAAATAATCTTTTAAGTATTAGTA
AAATACATTATTAATTTAGT

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: Cell Wall Hydrolase/Autolysin; Bacteriophage Endolysin; Phage Endolysin

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLIEEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVGGYGSEVYTYNGKYLIGADRVLKELNKLGFRNRGIKDQPLALTKRTKAKTIYIEVCFIDSAGDVAILNKYGIN
GIAKAIVNGVLGTSSNVSSKPVEENTSTGWINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHV
YYPPHGGYIYSKYIRY

Sequences:

>Translated_256_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLIEEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVGGYGSEVYTYNGKYLIGADRVLKELNKLGFRNRGIKDQPLALTKRTKAKTIYIEVCFIDSAGDVAILNKYGIN
GIAKAIVNGVLGTSSNVSSKPVEENTSTGWINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHV
YYPPHGGYIYSKYIRY
>Mature_256_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLIEEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVGGYGSEVYTYNGKYLIGADRVLKELNKLGFRNRGIKDQPLALTKRTKAKTIYIEVCFIDSAGDVAILNKYGIN
GIAKAIVNGVLGTSSNVSSKPVEENTSTGWINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHV
YYPPHGGYIYSKYIRY

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 28176; Mature: 28176

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLIEEIDKELRERGHRTNICRVDYAPTLQ
CEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
ESLNKQVALCNSVDADLNICIHFNTTVGGYGSEVYTYNGKYLIGADRVLKELNKLGFRNR
HHHCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCCCC
GIKDQPLALTKRTKAKTIYIEVCFIDSAGDVAILNKYGINGIAKAIVNGVLGTSSNVSSK
CCCCCCCEEEECCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
PVEENTSTGWINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHV
CCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEE
YYPPHGGYIYSKYIRY
EECCCCCEEHHEECCC
>Mature Secondary Structure
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLIEEIDKELRERGHRTNICRVDYAPTLQ
CEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
ESLNKQVALCNSVDADLNICIHFNTTVGGYGSEVYTYNGKYLIGADRVLKELNKLGFRNR
HHHCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCCCC
GIKDQPLALTKRTKAKTIYIEVCFIDSAGDVAILNKYGINGIAKAIVNGVLGTSSNVSSK
CCCCCCCEEEECCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
PVEENTSTGWINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHV
CCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEE
YYPPHGGYIYSKYIRY
EECCCCCEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA