| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is cheC
Identifier: 170756124
GI number: 170756124
Start: 2915786
End: 2916385
Strand: Reverse
Name: cheC
Synonym: CLD_1827
Alternate gene names: 170756124
Gene position: 2916385-2915786 (Counterclockwise)
Preceding gene: 170755986
Following gene: 170757287
Centisome position: 73.68
GC content: 32.83
Gene sequence:
>600_bases ATGGATTACAATAGTATGACGCCTCTTCAATTAGATGCACTTAAGGAAGTATCTAATATAGGAACAGGAAATGCCGCTAC AGCATTATCACAGCTTTTAGGTAGAAAAATAGATATGAATGTACCGGATATAAATATAGTTCCTTTTGAAGAGGTAATGG AAGAAATAGGAGATGAGAAAGTAGCTGTAGGAGTATTAGTAAGAGTATTAGGAGATACTCCTGGGAATATATTGTTTGTA TTTGAAAAAAGTACAGCATTAGATTTAGTTCATAGATTAACTGGCATGCAAGAGGAAGAATTAAGTGAGATGGGAAATTC AGTAATGTGTGAAATAGGAAATATAATATCCGCTTCATATATGAATGCTATAGCCAGATTCACTAATTTAACCATAACAC CATCCGTTCCGGCAGTATCATATGATATGTTAGGGGCAATATTGTCTACTACTTTTATAGAAGCAGGACAATACAATGAA CATGTTTTGGATATTGAAACTGTATTCAAAGAGGATGGATCAGAAATAAGTGGGCATTTTTATTACATACCAATGCCTGG TTCATTAGAAAAAATATTAAATACATTAGGAGTAAGTTAA
Upstream 100 bases:
>100_bases AAAGAATATATAGGAGCAACCATATTAGGAGATGGACTTGTAACATTAATCTTAGACGTGGCAGCTTTAGTATGATAAAA TCATAGGAGGGCTTATATAT
Downstream 100 bases:
>100_bases TTTGTATTAATTTGGAGGGAAAGAAAAATGGCAAAAGTATTAATCGTTGATGACGCTGCATTTATGAGAATGATGATAAA AGATATATTAGAAAAGAATG
Product: chemotaxis protein CheC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS
Sequences:
>Translated_199_residues MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS >Mature_199_residues MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS
Specific function: Involved in restoring normal CheY-P levels following the addition of attractant by increasing the rate of CheY-P hydrolysis. Is only 6% as active as FliY, which indicates that CheC may function after addition of an attractant to cope with increased levels
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 [H]
Pfam domain/function: PF04509 CheC [H]
EC number: NA
Molecular weight: Translated: 21640; Mature: 21640
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEK CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCH VAVGVLVRVLGDTPGNILFVFEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASY HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH MNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNEHVLDIETVFKEDGSEISGHF HHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEE YYIPMPGSLEKILNTLGVS EEEECCCCHHHHHHHHCCC >Mature Secondary Structure MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEK CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCH VAVGVLVRVLGDTPGNILFVFEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASY HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH MNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNEHVLDIETVFKEDGSEISGHF HHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEE YYIPMPGSLEKILNTLGVS EEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2832368; 9384377 [H]