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The map label for this gene is gidA

Identifier: 170756087

GI number: 170756087

Start: 3952344

End: 3954221

Strand: Reverse

Name: gidA

Synonym: CLD_0832

Alternate gene names: 170756087

Gene position: 3954221-3952344 (Counterclockwise)

Preceding gene: 170756593

Following gene: 170754945

Centisome position: 99.9

GC content: 29.82

Gene sequence:

>1878_bases
ATGAAATATTTAGCTGGAGATTTTGATGTAGTAGTTATTGGCGCAGGTCATGCGGGATGCGAGGCTGCATTAGCTTCTGC
AAGAATGGGATGTAAAACATTAATATGTACTATGAACCTAGATAGTATTGCTCTTATGGCTTGTAATCCTAATATAGGTG
GAACAGCAAAAGGACATTTAGTAAGAGAAATAGATGCTTTAGGTGGAGAAATGGGAATAAATATAGACCATACTTTTATA
CAATCTAGAATGCTTAATACTTCTAAGGGTCCAGCAGTTCATTCTTTAAGAGCTCAAGCAGATAAAAAAAGATATAGTGA
GAGAATGAAACATCTACTAGAGAAGGAAGAAAATGTTGTTTTAAGACAGCTAGAAGTTATAGAAATAGATGTAGAGGATA
ATGAAGTTAAAGGTGTTTTAACTAAAAATGGAGCATATTTTACTACAAAAGCTATAATATTATGTACTGGAACTTATTTA
AAGGGTAAAATAATAATAGGAGATATAATATATAGTAGTGGACCAAGTGGTTTGTATCCTGCTAATGATTTATCTCAAAG
TTTATTAAATTTGGGTATAAATCTTAGAAGATTTAAAACAGGAACCCCTGCAAGAATAAATAAAAGATCAGTAGATTTTT
CTAAAATGATAGAACAACCAGGAGACGAAAAAATAGTTCCTTTTTCATTTATTCATAATAAACTAGACAAAGACCAGATT
TCTTGTTATTTAACTTATACATCTGAAGAAACTCATAAAATAATACATGAAAATATACATAGATCTCCATTATATAATGG
ATCAATAGAAGGGGTAGGTCCAAGATACTGCCCATCTATTGAAGATAAGATTGTTAGATTTCCAGATAAAGATAAGCATC
AAATATTCATAGAACCAGAAGGTGAAAATACAGAAGAATTATATGTTGGCGGTATGTCTAGTTCATTACCAGAAGATGTT
CAAATAAAAATGTATAGAAGTGTACCAGGTTTAGAAAATGCAGAAATACTAAGAACTGCCTATGCTATAGAGTATGATTG
TATTGATCCTCAACAACTAGATTTAACCTTAGAATTCAAAAATATAAATGGGTTATATGGGGCAGGTCAATTTAATGGAA
GTTCAGGTTATGAGGAAGCTGCAGCACAGGGACTTATAGCTGGAATTAATGCTGTGTTAAAAATAAAAGAAAAAAACCCA
TTAATATTGAAAAGATCAGATGCTTATATAGGTGTACTTATAGATGATTTAGTAACAAAGGGCACAAATGAGCCTTATAG
AATGATGACATCAAGAGCAGAATATAGATTGCTGTTAAGACAAGATAATGCAGATTTAAGATTAACAGAGTTAGGCTATA
AAGTCGGACTTGTAAAAGAGGATAGGTATAATAAATTTCTAAATAGGAAAAAAAATGTAGAAAATGAAATAGAAAGATTA
AGAAATATGCAAATAACAGGAAAAAGAGAAATAAACGAATTTTTATTAGAGAAAGGGTCTACTGAACTAAAAAAGCCTAT
TAGTTTATATGAATTAATAAAAAGACCAGAATTAGATTATTTTAAAGTTGAACCTTTAGATGATAAAAGACCAAGTTTAA
GTGATGATGAAAAAGAAGAAATAAATATAATTGCAAAATATGAGGGATATATAAACAAACAGTTAGAACAAGTTGAGCAA
TTTAAGAAGTATGAAGATAGATTAATACCGAAAAGTATTAATTATCTAGATATAAAAGGGTTGAGATTAGAGGCTATTCA
AAAATTGGAAAAAATAAAGCCTATAAATATAGGGCAGGCTTCTAGAATTTCAGGTGTATCTCCAGCAGATATATCAGTAT
TACTTATATATATGGAAAGAAAAGATAGAGAAAACTAG

Upstream 100 bases:

>100_bases
ATGCGTGGAAATATCTTGGAGAAATTACTGGTGATACTTTAGATGAGAACATTATAGATAAAATATTTTCTGAATTTTGT
TTAGGAAAGTAGGTAATTAT

Downstream 100 bases:

>100_bases
AAAATCCTTTTGGAGGTTTTTAAATGGAATTTTTCAACATACTACAATCAGCATGCAATGATGTTAATTTAGATTTTAAT
GATAAAAAATATAATCAGCT

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A [H]

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDALGGEMGINIDHTFI
QSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYL
KGKIIIGDIIYSSGPSGLYPANDLSQSLLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEELYVGGMSSSLPEDV
QIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNP
LILKRSDAYIGVLIDDLVTKGTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEEINIIAKYEGYINKQLEQVEQ
FKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQASRISGVSPADISVLLIYMERKDREN

Sequences:

>Translated_625_residues
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDALGGEMGINIDHTFI
QSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYL
KGKIIIGDIIYSSGPSGLYPANDLSQSLLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEELYVGGMSSSLPEDV
QIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNP
LILKRSDAYIGVLIDDLVTKGTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEEINIIAKYEGYINKQLEQVEQ
FKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQASRISGVSPADISVLLIYMERKDREN
>Mature_625_residues
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHLVREIDALGGEMGINIDHTFI
QSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVVLRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYL
KGKIIIGDIIYSSGPSGLYPANDLSQSLLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPEGENTEELYVGGMSSSLPEDV
QIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFKNINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNP
LILKRSDAYIGVLIDDLVTKGTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEEINIIAKYEGYINKQLEQVEQ
FKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQASRISGVSPADISVLLIYMERKDREN

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family [H]

Homologues:

Organism=Homo sapiens, GI74024895, Length=638, Percent_Identity=40.5956112852665, Blast_Score=442, Evalue=1e-124,
Organism=Homo sapiens, GI19882217, Length=661, Percent_Identity=39.1830559757943, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI183227703, Length=678, Percent_Identity=38.2005899705015, Blast_Score=423, Evalue=1e-118,
Organism=Escherichia coli, GI2367273, Length=616, Percent_Identity=49.6753246753247, Blast_Score=610, Evalue=1e-175,
Organism=Caenorhabditis elegans, GI17534255, Length=620, Percent_Identity=39.8387096774194, Blast_Score=457, Evalue=1e-129,
Organism=Saccharomyces cerevisiae, GI6321202, Length=620, Percent_Identity=43.0645161290323, Blast_Score=479, Evalue=1e-136,
Organism=Drosophila melanogaster, GI24658174, Length=634, Percent_Identity=41.7981072555205, Blast_Score=444, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595 [H]

Pfam domain/function: PF01134 GIDA [H]

EC number: NA

Molecular weight: Translated: 70588; Mature: 70588

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHL
CCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHH
VREIDALGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVV
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYP
EEEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEECCEEECEEEEEEEEECCCCCCCCC
ANDLSQSLLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCE
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPE
EEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEEECC
GENTEELYVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFK
CCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCEEEEEEEEE
NINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTK
CCCCEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHC
GTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCEEEEEEECHHHHHHHHHHCCHHHHHHHH
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEE
HCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
INIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQA
EEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
SRISGVSPADISVLLIYMERKDREN
CCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHL
CCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHH
VREIDALGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVV
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYP
EEEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEECCEEECEEEEEEEEECCCCCCCCC
ANDLSQSLLNLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHNKLDKDQI
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCE
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPE
EEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEEECC
GENTEELYVGGMSSSLPEDVQIKMYRSVPGLENAEILRTAYAIEYDCIDPQQLDLTLEFK
CCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCEEEEEEEEE
NINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEKNPLILKRSDAYIGVLIDDLVTK
CCCCEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHC
GTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCEEEEEEECHHHHHHHHHHCCHHHHHHHH
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEE
HCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
INIIAKYEGYINKQLEQVEQFKKYEDRLIPKSINYLDIKGLRLEAIQKLEKIKPINIGQA
EEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
SRISGVSPADISVLLIYMERKDREN
CCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA