| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756019
Identifier: 170756019
GI number: 170756019
Start: 1544259
End: 1545437
Strand: Direct
Name: 170756019
Synonym: CLD_3157
Alternate gene names: NA
Gene position: 1544259-1545437 (Clockwise)
Preceding gene: 170756828
Following gene: 170754759
Centisome position: 39.01
GC content: 22.48
Gene sequence:
>1179_bases GTGAGATTAAAAGCATTTATAAAACTAACATTAAAATCTGTATTTAGAGAATTACCTGTTATGATATTTACTTTTGCAAT ATTTCCTATAGTTATAAGTTCATTGCATGGATATTTTCAAAAGGATATGTTTAATCCTAAAAATCAAATAGATAGAATAG CAATTTATGTAGAGGATAAAGATAATTCAAAATTATCTAATGAATTTATAAAATTTTTGGGAAGTAATGGGTTAGAGAAA TTTATAGATATTAAAAAAAATAAGGAAAAAGCTATAGAGGAAGTAATAATTCCAAAGGGATATGAAAAAAGCATTATAGA AGATAAAGAAATTGCAATAAAAATAAATGAAAGAGAAAAAGATAAGGAAATATCCTCAAAAATACTAAAGGATTTAATAG ATAATTATAATAAAGAAGTGAAAAATAATCTTACAATAGGAAACAACATAAATAAAATGGATATTTCTAAAGAAAAAAAG GATCTATTAGTAAAGAAAATATCAAAAGATATTACTAAAATATATAAAAAGGATGCTATAAGAAATACCATAGTTAAAAG TACAAGGAATTTAACTTCCTATGAGTACTATTCAGTATCCATATTAAGTTTTATGTTTATAGTAACTATAATGTCGTTGT GTAATGGGTATTATTCAGAAAAGAAAAATGGTATTTTTCAAAGAACATTATCTACAAGTATAAGTAAGGTTGAATATTTT AATTATTCATTAGTTTCTTGGTATATTTTTGCTATTTTATTTAATTCCATATATGTATTGTCTTATAGATTTTTAGGATT ATCTTTTAAAGGTAATATAGGACTTTTATTATTAATAGTGCTTACCAAAAGTCTTTTAGAAGTGGCTATATCCTCTGTAG TGATAGCCTTCTTTAAGGAACAAAAGATGGCAGCAATATTTTTAAATACAGTTATTATAATAAGTGTAAGTTTAGGTGGA GTATTTTATCCATTAGAGAAAGTTATTAATAGTTTTAATAAAATATTTAGGGTTATAAGTGATTTTGCACCTAATGTACT TATTATAAAAACCTATAAAAGCTTTTTAATTTATAATTCCTTTGAAGCTATTAAATATTATCTAATTACATTTATTCTTA TTTCTATGGTTTTATATAGTATTAGTCTTTTAAAGATTAATATGAAATGGGGGGATTAA
Upstream 100 bases:
>100_bases TTAATATTAATAAATTAGATTGTTAATGCAGGAAATTTATATATTTAAAATATTGAAATGAGAAATTTATAAATTAAATT TTATATAGGGAGGGAAGAAT
Downstream 100 bases:
>100_bases CATGAAAATTTTAAGATATGGATTTATACAATTCAAAAGAATGATAAAAGATATAAAAGTTATAGGTTTTATGCTTATTA TGCCCCTAGTAGTAATAACC
Product: putative ABC transporter, permease protein
Products: NA
Alternate protein names: Permease; ABC Transporter Permease
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD
Sequences:
>Translated_392_residues MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD >Mature_392_residues MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45406; Mature: 45406
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC DNSKLSNEFIKFLGSNGLEKFIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREK CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHH DKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKKDLLVKKISKDITKIYKKDAI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKE HHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKMAAIFLNTVIIISVSLGGVFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNS HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH FEAIKYYLITFILISMVLYSISLLKINMKWGD HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC >Mature Secondary Structure MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC DNSKLSNEFIKFLGSNGLEKFIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREK CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHH DKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKKDLLVKKISKDITKIYKKDAI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKE HHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKMAAIFLNTVIIISVSLGGVFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNS HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH FEAIKYYLITFILISMVLYSISLLKINMKWGD HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA