| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754759
Identifier: 170754759
GI number: 170754759
Start: 1545439
End: 1546539
Strand: Direct
Name: 170754759
Synonym: CLD_3156
Alternate gene names: NA
Gene position: 1545439-1546539 (Clockwise)
Preceding gene: 170756019
Following gene: 170756546
Centisome position: 39.04
GC content: 25.25
Gene sequence:
>1101_bases ATGAAAATTTTAAGATATGGATTTATACAATTCAAAAGAATGATAAAAGATATAAAAGTTATAGGTTTTATGCTTATTAT GCCCCTAGTAGTAATAACCATAATTAATTTTGCAATTAAAAGTGGTGGCGGAAGTACTATTATGGTTGATGTAGCTTTTA ATGTAGAAGATAATGGGAAAGAGGGAAAACAGCTTTTAGAAGAACTTAAAATACCCACTAAATCTATCTTTTATAAAGAT AAAGATAAAGCTATAGAATCTTTGAATAAAAATGATGTAGTAGCTGTATATGAAATACCCAAGAACTTCTCAGAGAAGAT TAAAAAAGGAGAAAAACCAGAAATAAAAGCATATAAAAAAGAAATTGGTAATGGAACTCTACCTATTGAAAAGTCTTTAA ATAATAATATAAATAAAAAAGTAAGAGAAAATTTATTAATAAACAAAAACATTATAAAAATTAAAAATCAGTTAGATAAC AATAGTGTGAAAACAGTTATAGAAAATACTAAAAATGTAGAGGCAGGAGCATTCTTAGTACTAAGTCTTATAATAAATTT TATAATTTTTTCAGCTAATAATGTAAGTTCAGAAATACTAAATTTTAAGAAACAAAATATATTAAAAAGGGCTATAACTA CTTCTAACAGAGGATTTGAAATAATAGGTGGAATATACATAGGTATGATATTAATTCAAAGCTTTGTGTATATGTCTGTT TATATAGGCGGGAAATTTATAATAGGATATTCCTTTGACAATTTGATTTTTATACTTATAAATACAATAGTAGCTAGCAT ATTTTCAGTAAGTTTAGGTGTATTTGTAACTAGATTATTTCAAAATGAACCTGTAGTTGCCCTTGTAGTTAACATAGTAG GTATAAGCACAACATTCTTAAGTAGTATACACTCTATGGGATTATCTGTGAGTAAATCTTCTTGGATACTATTGAATATA GAAAAATTTACTCCGCAATATTGGATATTTGATAGCATAAAGAATTCTAGTATATTTCCGAATATATTTATAGTAATACT TATGTCATTAGTATTATTTACTGCAGGAAACATTAAAGTAAGAGATTTTGCAACTAACTAA
Upstream 100 bases:
>100_bases TTTGAAGCTATTAAATATTATCTAATTACATTTATTCTTATTTCTATGGTTTTATATAGTATTAGTCTTTTAAAGATTAA TATGAAATGGGGGGATTAAC
Downstream 100 bases:
>100_bases TATATGGAGGTGATTTTTGTGAAAAAAGCAAATAAAACCTTAATTATAGGTATTTTTATTATTACAATTACTACGAGCTT AAGACATTTTACAATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGSTIMVDVAFNVEDNGKEGKQLLEELKIPTKSIFYKD KDKAIESLNKNDVVAVYEIPKNFSEKIKKGEKPEIKAYKKEIGNGTLPIEKSLNNNINKKVRENLLINKNIIKIKNQLDN NSVKTVIENTKNVEAGAFLVLSLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEIIGGIYIGMILIQSFVYMSV YIGGKFIIGYSFDNLIFILINTIVASIFSVSLGVFVTRLFQNEPVVALVVNIVGISTTFLSSIHSMGLSVSKSSWILLNI EKFTPQYWIFDSIKNSSIFPNIFIVILMSLVLFTAGNIKVRDFATN
Sequences:
>Translated_366_residues MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGSTIMVDVAFNVEDNGKEGKQLLEELKIPTKSIFYKD KDKAIESLNKNDVVAVYEIPKNFSEKIKKGEKPEIKAYKKEIGNGTLPIEKSLNNNINKKVRENLLINKNIIKIKNQLDN NSVKTVIENTKNVEAGAFLVLSLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEIIGGIYIGMILIQSFVYMSV YIGGKFIIGYSFDNLIFILINTIVASIFSVSLGVFVTRLFQNEPVVALVVNIVGISTTFLSSIHSMGLSVSKSSWILLNI EKFTPQYWIFDSIKNSSIFPNIFIVILMSLVLFTAGNIKVRDFATN >Mature_366_residues MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGSTIMVDVAFNVEDNGKEGKQLLEELKIPTKSIFYKD KDKAIESLNKNDVVAVYEIPKNFSEKIKKGEKPEIKAYKKEIGNGTLPIEKSLNNNINKKVRENLLINKNIIKIKNQLDN NSVKTVIENTKNVEAGAFLVLSLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEIIGGIYIGMILIQSFVYMSV YIGGKFIIGYSFDNLIFILINTIVASIFSVSLGVFVTRLFQNEPVVALVVNIVGISTTFLSSIHSMGLSVSKSSWILLNI EKFTPQYWIFDSIKNSSIFPNIFIVILMSLVLFTAGNIKVRDFATN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41108; Mature: 41108
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGSTIMVDVAFNVEDNGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCH EGKQLLEELKIPTKSIFYKDKDKAIESLNKNDVVAVYEIPKNFSEKIKKGEKPEIKAYKK HHHHHHHHHCCCHHHHEECCHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHH EIGNGTLPIEKSLNNNINKKVRENLLINKNIIKIKNQLDNNSVKTVIENTKNVEAGAFLV HHCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHCCCCCCHHHHHH LSLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEIIGGIYIGMILIQSFVYMSV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH YIGGKFIIGYSFDNLIFILINTIVASIFSVSLGVFVTRLFQNEPVVALVVNIVGISTTFL HCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SSIHSMGLSVSKSSWILLNIEKFTPQYWIFDSIKNSSIFPNIFIVILMSLVLFTAGNIKV HHHHHCCCEECCCCEEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE RDFATN EEECCC >Mature Secondary Structure MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGSTIMVDVAFNVEDNGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCH EGKQLLEELKIPTKSIFYKDKDKAIESLNKNDVVAVYEIPKNFSEKIKKGEKPEIKAYKK HHHHHHHHHCCCHHHHEECCHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHH EIGNGTLPIEKSLNNNINKKVRENLLINKNIIKIKNQLDNNSVKTVIENTKNVEAGAFLV HHCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHEEHHHCCCCHHHHHHHCCCCCCHHHHHH LSLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEIIGGIYIGMILIQSFVYMSV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH YIGGKFIIGYSFDNLIFILINTIVASIFSVSLGVFVTRLFQNEPVVALVVNIVGISTTFL HCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SSIHSMGLSVSKSSWILLNIEKFTPQYWIFDSIKNSSIFPNIFIVILMSLVLFTAGNIKV HHHHHCCCEECCCCEEEEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE RDFATN EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA