| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755917
Identifier: 170755917
GI number: 170755917
Start: 728538
End: 729650
Strand: Direct
Name: 170755917
Synonym: CLD_0150
Alternate gene names: NA
Gene position: 728538-729650 (Clockwise)
Preceding gene: 170757133
Following gene: 170757250
Centisome position: 18.41
GC content: 26.06
Gene sequence:
>1113_bases ATGAGAAAAAAAGCTATAATTTTTTTACTATTACTATTACTATTAATAGTTACGCTAAGTGCTTCAGGTTGTGGAAAGAA ACAAAAAACAAGTGTATTAACAAATGATGTAAAACAACAAGAGGCCATGAAAGAAAATGAAATAAAAAAATTTATTAAAG ATGGAACTAATTTTCTAAATGCAGGGAAATATGATGATGCTAAAAGTTCTTTTGAAAAAGCAATTTCAATGGACAAGTCT AATAAGGTATCTTATATAGAAATAAAAAATAAATATATGGAAAAAAATAGAATGGATGATGCTTATTATTTTATAAAGCT AGCTATAAGCAATAATGTTGATACTGAAAACATGAAAAAGTTATTAGATAATATAAAATCAAAATTTCAAGTTACTAAAT TAGATGCGGGTGTATATCAAAATCATGAATATCAGTTACCAGATAAAATTAGAGCAAAAATAAATAATGAGGACAAAGAA GTTGGAGTTGTTTGGAATAATAATAATGTAGATACAAGTAAAGTAGGAACTATAAAGTATGAAGGTAAAATAGAACAGTA TGATAGGGATGCTGAATTAAATCTTGAAATAATTGAGATTGAGAAAGAAAAAGAGGCTAAAGAAGAAAATAACACTGAAA AAGCCAAGAATACTCAAGAAGAAAATAAGAATGAAAAAGCAAAAACAGGGAAATCAGGAAAGCAGATAGGATTTATAAAT GAAATATATGAACAAAATGGCAAAAGATATTTAAAATGTGACGAAGTAGAATTTTTCCTTAACGATGGTACTAATGAGAG TGCTCTTAAAGCAGAAGCTATAAAAGATGGCAAAGAAAAGGAGTGGAATGCTAGAAGAATATCACATCAGTTTTATATTA GAAATAAAGATAAGAGTTTAGAAACTTATGAAATATCCCCAAAAGTGGATGTATATGTTTGTAAATATCGTATAGATTCA AATGCAACAAATTCTGCAGATTTAGCAAAAATTGGTTATCAAAAATTTAAGACTTTAGATAATATTTATGGTTCAGCTGA TAATCTCTATTTACATTATATATATGTAGAAAATAATGTAATAGTAAGAATAGAAGAACAGTTTATACCTTAA
Upstream 100 bases:
>100_bases TAAAATTGTTATACGGAAATAATTTGGTAACAAATTTATTAATTTTGGTAAAAATAGCATGATAATATTTAAGTATACCA AATGCAGGGAGTGAAAATTC
Downstream 100 bases:
>100_bases AATTATGCAATATTAAATAAGCTAAAAATATCTTAGGCTAAATAGTGGTGAGTATAAGAATATTACTGAAAAAAAGAGTT AGTAATATTCTTATATGTAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MRKKAIIFLLLLLLLIVTLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNAGKYDDAKSSFEKAISMDKS NKVSYIEIKNKYMEKNRMDDAYYFIKLAISNNVDTENMKKLLDNIKSKFQVTKLDAGVYQNHEYQLPDKIRAKINNEDKE VGVVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLEIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFIN EIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDS NATNSADLAKIGYQKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP
Sequences:
>Translated_370_residues MRKKAIIFLLLLLLLIVTLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNAGKYDDAKSSFEKAISMDKS NKVSYIEIKNKYMEKNRMDDAYYFIKLAISNNVDTENMKKLLDNIKSKFQVTKLDAGVYQNHEYQLPDKIRAKINNEDKE VGVVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLEIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFIN EIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDS NATNSADLAKIGYQKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP >Mature_370_residues MRKKAIIFLLLLLLLIVTLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLNAGKYDDAKSSFEKAISMDKS NKVSYIEIKNKYMEKNRMDDAYYFIKLAISNNVDTENMKKLLDNIKSKFQVTKLDAGVYQNHEYQLPDKIRAKINNEDKE VGVVWNNNNVDTSKVGTIKYEGKIEQYDRDAELNLEIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFIN EIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDS NATNSADLAKIGYQKFKTLDNIYGSADNLYLHYIYVENNVIVRIEEQFIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42869; Mature: 42869
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKAIIFLLLLLLLIVTLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLN CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGKYDDAKSSFEKAISMDKSNKVSYIEIKNKYMEKNRMDDAYYFIKLAISNNVDTENMKK CCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHH LLDNIKSKFQVTKLDAGVYQNHEYQLPDKIRAKINNEDKEVGVVWNNNNVDTSKVGTIKY HHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEE EGKIEQYDRDAELNLEIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFIN CCCHHHCCCCCCCEEEEEEECCHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCEEHHHH EIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSL HHHHCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCC ETYEISPKVDVYVCKYRIDSNATNSADLAKIGYQKFKTLDNIYGSADNLYLHYIYVENNV EEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCE IVRIEEQFIP EEEEECCCCC >Mature Secondary Structure MRKKAIIFLLLLLLLIVTLSASGCGKKQKTSVLTNDVKQQEAMKENEIKKFIKDGTNFLN CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGKYDDAKSSFEKAISMDKSNKVSYIEIKNKYMEKNRMDDAYYFIKLAISNNVDTENMKK CCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHH LLDNIKSKFQVTKLDAGVYQNHEYQLPDKIRAKINNEDKEVGVVWNNNNVDTSKVGTIKY HHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEE EGKIEQYDRDAELNLEIIEIEKEKEAKEENNTEKAKNTQEENKNEKAKTGKSGKQIGFIN CCCHHHCCCCCCCEEEEEEECCHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCEEHHHH EIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWNARRISHQFYIRNKDKSL HHHHCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCC ETYEISPKVDVYVCKYRIDSNATNSADLAKIGYQKFKTLDNIYGSADNLYLHYIYVENNV EEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCE IVRIEEQFIP EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA