| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757133
Identifier: 170757133
GI number: 170757133
Start: 727301
End: 728440
Strand: Direct
Name: 170757133
Synonym: CLD_0151
Alternate gene names: NA
Gene position: 727301-728440 (Clockwise)
Preceding gene: 170754290
Following gene: 170755917
Centisome position: 18.37
GC content: 24.3
Gene sequence:
>1140_bases ATGAGAAAAAAAGCTATAATTTCTTTACTATTAATATTAATAACTATGTTAGGCATTTCAGGCTGTGGTAAAAAAGAAAA GACAAGTGTATTAACCAACAATGTAAAACAACAAGAAGCCATGAAAGAAAATGAAGTGAAAAAGTTTATTAAAAATGGAA CTGATTTTTTAAATGCAGGAAAATATGATGATGCTAAAAGTTCTTTTGAAAAAGCAATCTTAATGGAGAAGTCTAATAAA GGATCTTATATAGAAATAAAAAATAAATGTATGGAAAAGAATAGATTAGATGATGCTTATTATTTTATAAAGCTAGCTGT AAACAATAATGTTGATACTGAAAATATGAAAAAACTATTAAGTGATATAAAATCAAAATTTGAAGTTACTAAATTATATG AAAATGTATATCAAAATCATGAATATCAGTTACCAGATAAAATTAAAGCAAAAATAAATAATGAGGACAAAGAAGTTGGA GTTGTTTGGAATAACAATAATGTAGATACAAGTGAAGTAGGAACTATAAAGTACCAAGGAAAAATAGAACAATATGATAA AATTGTTGAATTAAATCTTAAAGTAATGGAGTTTCAAAAAGAAAATAAGAATCAAAAAGTGAAGAATGTTAAAAAAATTA AAAATTCTCAAGAAGAAAATAAGAATCAAGAAGTAAAGAATTCTCAGGAAGAAAATAAAAATCAGAAAGTAAAAGAAGTT AAAGATGGAAAGCAGATAGGATTTATAAATGAAATATATGAACAAAATGGGAAGAGATATTTAAAATTCGATGATGTAGA ATTTTTCCATAATAAGGACGCTGATGATAGAACTGCAGAAAAAGAGGCTATAAAAGATGGTAAGAAGGATTTATTACTAG ATGGAAGAATGACAGATGATTATTACTTTAGAAATAAAGATAAGAGCTTAGAAGATTATGAAATATCTCCAAATGTAGAA ATAGATATTTGTAGATACCACATTGATTCAAATGATGTTACTTCAAAGTTACAACAAATTAGAATTAGCTATGAAAAATT TAAAGTTTTAGATAATGTTTATGGACAAAACAATGCTTTATTATATATATATGTAGAAAATAACGCAATAGTAAAAATAC AAGAACAATATAGACCTTAA
Upstream 100 bases:
>100_bases TAAAATACCTATCCAGAAACAAGTTGGTAACAAATTCATTATATTTGGTAAAAATACCATGGTAATATTTAGGTATACCA AATGGGAGGAGTGAATTTTT
Downstream 100 bases:
>100_bases AATTGTTATACGGAAATAATTTGGTAACAAATTTATTAATTTTGGTAAAAATAGCATGATAATATTTAAGTATACCAAAT GCAGGGAGTGAAAATTCATG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRKKAIISLLLILITMLGISGCGKKEKTSVLTNNVKQQEAMKENEVKKFIKNGTDFLNAGKYDDAKSSFEKAILMEKSNK GSYIEIKNKCMEKNRLDDAYYFIKLAVNNNVDTENMKKLLSDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSEVGTIKYQGKIEQYDKIVELNLKVMEFQKENKNQKVKNVKKIKNSQEENKNQEVKNSQEENKNQKVKEV KDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEKEAIKDGKKDLLLDGRMTDDYYFRNKDKSLEDYEISPNVE IDICRYHIDSNDVTSKLQQIRISYEKFKVLDNVYGQNNALLYIYVENNAIVKIQEQYRP
Sequences:
>Translated_379_residues MRKKAIISLLLILITMLGISGCGKKEKTSVLTNNVKQQEAMKENEVKKFIKNGTDFLNAGKYDDAKSSFEKAILMEKSNK GSYIEIKNKCMEKNRLDDAYYFIKLAVNNNVDTENMKKLLSDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSEVGTIKYQGKIEQYDKIVELNLKVMEFQKENKNQKVKNVKKIKNSQEENKNQEVKNSQEENKNQKVKEV KDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEKEAIKDGKKDLLLDGRMTDDYYFRNKDKSLEDYEISPNVE IDICRYHIDSNDVTSKLQQIRISYEKFKVLDNVYGQNNALLYIYVENNAIVKIQEQYRP >Mature_379_residues MRKKAIISLLLILITMLGISGCGKKEKTSVLTNNVKQQEAMKENEVKKFIKNGTDFLNAGKYDDAKSSFEKAILMEKSNK GSYIEIKNKCMEKNRLDDAYYFIKLAVNNNVDTENMKKLLSDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVG VVWNNNNVDTSEVGTIKYQGKIEQYDKIVELNLKVMEFQKENKNQKVKNVKKIKNSQEENKNQEVKNSQEENKNQKVKEV KDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEKEAIKDGKKDLLLDGRMTDDYYFRNKDKSLEDYEISPNVE IDICRYHIDSNDVTSKLQQIRISYEKFKVLDNVYGQNNALLYIYVENNAIVKIQEQYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44421; Mature: 44421
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKAIISLLLILITMLGISGCGKKEKTSVLTNNVKQQEAMKENEVKKFIKNGTDFLNAG CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC KYDDAKSSFEKAILMEKSNKGSYIEIKNKCMEKNRLDDAYYFIKLAVNNNVDTENMKKLL CCCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHH SDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVGVVWNNNNVDTSEVGTIKYQG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECC KIEQYDKIVELNLKVMEFQKENKNQKVKNVKKIKNSQEENKNQEVKNSQEENKNQKVKEV CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCHHHHHHCHHHHHHHHHHHHH KDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEKEAIKDGKKDLLLDGRMTDD HCCCCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC YYFRNKDKSLEDYEISPNVEIDICRYHIDSNDVTSKLQQIRISYEKFKVLDNVYGQNNAL CEECCCCCCCCCEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LYIYVENNAIVKIQEQYRP EEEEECCCEEEEEHHCCCC >Mature Secondary Structure MRKKAIISLLLILITMLGISGCGKKEKTSVLTNNVKQQEAMKENEVKKFIKNGTDFLNAG CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC KYDDAKSSFEKAILMEKSNKGSYIEIKNKCMEKNRLDDAYYFIKLAVNNNVDTENMKKLL CCCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHH SDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVGVVWNNNNVDTSEVGTIKYQG HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECC KIEQYDKIVELNLKVMEFQKENKNQKVKNVKKIKNSQEENKNQEVKNSQEENKNQKVKEV CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCHHHHHHCHHHHHHHHHHHHH KDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEKEAIKDGKKDLLLDGRMTDD HCCCCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC YYFRNKDKSLEDYEISPNVEIDICRYHIDSNDVTSKLQQIRISYEKFKVLDNVYGQNNAL CEECCCCCCCCCEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LYIYVENNAIVKIQEQYRP EEEEECCCEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA