| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755911
Identifier: 170755911
GI number: 170755911
Start: 1613805
End: 1614731
Strand: Direct
Name: 170755911
Synonym: CLD_3100
Alternate gene names: NA
Gene position: 1613805-1614731 (Clockwise)
Preceding gene: 170756653
Following gene: 170756667
Centisome position: 40.77
GC content: 23.73
Gene sequence:
>927_bases ATGAACTATTTAAATTATATTTCTAAAAAAGTTACTAAAGATTTTGGAACAAGACATAATTACAATGAGAAAACAAATTT TTTAGAATTTATAGATAAGGAATTGAAATTTTTAGGTTATGAAACAGAGATAGTACAAGGGAAAAATGTAAAACAATGTA GGAATTTATGTACAGTAGAAAGTAATGCAGATATTATATTTACTGCTCATTATGATACACCAGGTACTATGCCTAAATTT CTTGGGTTTATATTTAAACTTTTTGGTCATACAAGGCAAATAATAGGTAGTATAATATACATTATTATTATTTTATTAGT AATTAGATTTATAAGAAATACATTAAATGTAAGTATATCTTATATGATAGTATTGATATTAATTGTTTTTCCAATGCTTA TAAAAAATAAAAAAAACTATAATGATAACTCAAGTGGAGTGATAACACTTTTAAATATTGCTTATGAGCTAAAAAATAAT GAGAGTTTAAAGGGGAAGGCAGACAAAATAAAAATAGTATTTTTAGATAACGAGGAAAGCGGCTTGTTAGGATCTAATTT ACTATCAAAATATTGGCAAGAAAAAGATGAATATTTTAAAGAGAAAAAAATAATTAATTTTGATTGTGTGGGAATAGGGG ATATACCTATAGTTTATTATTCAAAGGAATTAGATTATGAGTTAGCTGACTTCCTGCAAAATATTTTAAGTTGTTGTGAA AAGAACAGTAAGAAATTTATGTGTAAATATTATCCATTATCTGATGACTATTCCTTTAAAAAAAATCCAGCTATAAGTAT AATTTTTTCTAATAACAGCATAATACCAGGGGGATATTATATTCCTAATGTACATTGCTCAAAAGATAATGTTTTAAAAT TAGAAAATATTCAATGGTTAACAAGAGAAATATTGAAAAAAATTTAA
Upstream 100 bases:
>100_bases GCACAATATTATAATATAATAATTTTCATAATAATTAATATATATAATATTTTGGAGATCATTAAATGATAGGATTTAAT AAAGTATTAATGGGGGATAT
Downstream 100 bases:
>100_bases TTTGTTATAGGTAATTTTTGTAGTTTTATAATTAAAATAAACACTATGAAAATCTATTAGATATATAGTTCACAGTGTTT TTTATTATATTTAGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNYLNYISKKVTKDFGTRHNYNEKTNFLEFIDKELKFLGYETEIVQGKNVKQCRNLCTVESNADIIFTAHYDTPGTMPKF LGFIFKLFGHTRQIIGSIIYIIIILLVIRFIRNTLNVSISYMIVLILIVFPMLIKNKKNYNDNSSGVITLLNIAYELKNN ESLKGKADKIKIVFLDNEESGLLGSNLLSKYWQEKDEYFKEKKIINFDCVGIGDIPIVYYSKELDYELADFLQNILSCCE KNSKKFMCKYYPLSDDYSFKKNPAISIIFSNNSIIPGGYYIPNVHCSKDNVLKLENIQWLTREILKKI
Sequences:
>Translated_308_residues MNYLNYISKKVTKDFGTRHNYNEKTNFLEFIDKELKFLGYETEIVQGKNVKQCRNLCTVESNADIIFTAHYDTPGTMPKF LGFIFKLFGHTRQIIGSIIYIIIILLVIRFIRNTLNVSISYMIVLILIVFPMLIKNKKNYNDNSSGVITLLNIAYELKNN ESLKGKADKIKIVFLDNEESGLLGSNLLSKYWQEKDEYFKEKKIINFDCVGIGDIPIVYYSKELDYELADFLQNILSCCE KNSKKFMCKYYPLSDDYSFKKNPAISIIFSNNSIIPGGYYIPNVHCSKDNVLKLENIQWLTREILKKI >Mature_308_residues MNYLNYISKKVTKDFGTRHNYNEKTNFLEFIDKELKFLGYETEIVQGKNVKQCRNLCTVESNADIIFTAHYDTPGTMPKF LGFIFKLFGHTRQIIGSIIYIIIILLVIRFIRNTLNVSISYMIVLILIVFPMLIKNKKNYNDNSSGVITLLNIAYELKNN ESLKGKADKIKIVFLDNEESGLLGSNLLSKYWQEKDEYFKEKKIINFDCVGIGDIPIVYYSKELDYELADFLQNILSCCE KNSKKFMCKYYPLSDDYSFKKNPAISIIFSNNSIIPGGYYIPNVHCSKDNVLKLENIQWLTREILKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35812; Mature: 35812
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLNYISKKVTKDFGTRHNYNEKTNFLEFIDKELKFLGYETEIVQGKNVKQCRNLCTVE CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHEEEC SNADIIFTAHYDTPGTMPKFLGFIFKLFGHTRQIIGSIIYIIIILLVIRFIRNTLNVSIS CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH YMIVLILIVFPMLIKNKKNYNDNSSGVITLLNIAYELKNNESLKGKADKIKIVFLDNEES HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEEEECCCC GLLGSNLLSKYWQEKDEYFKEKKIINFDCVGIGDIPIVYYSKELDYELADFLQNILSCCE CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH KNSKKFMCKYYPLSDDYSFKKNPAISIIFSNNSIIPGGYYIPNVHCSKDNVLKLENIQWL CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEECCCEEECCCCEEEEHHHHHH TREILKKI HHHHHHHC >Mature Secondary Structure MNYLNYISKKVTKDFGTRHNYNEKTNFLEFIDKELKFLGYETEIVQGKNVKQCRNLCTVE CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHEEEC SNADIIFTAHYDTPGTMPKFLGFIFKLFGHTRQIIGSIIYIIIILLVIRFIRNTLNVSIS CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH YMIVLILIVFPMLIKNKKNYNDNSSGVITLLNIAYELKNNESLKGKADKIKIVFLDNEES HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEEEECCCC GLLGSNLLSKYWQEKDEYFKEKKIINFDCVGIGDIPIVYYSKELDYELADFLQNILSCCE CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH KNSKKFMCKYYPLSDDYSFKKNPAISIIFSNNSIIPGGYYIPNVHCSKDNVLKLENIQWL CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEECCCEEECCCCEEEEHHHHHH TREILKKI HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA