| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755836
Identifier: 170755836
GI number: 170755836
Start: 1564378
End: 1565412
Strand: Direct
Name: 170755836
Synonym: CLD_3139
Alternate gene names: NA
Gene position: 1564378-1565412 (Clockwise)
Preceding gene: 170755032
Following gene: 170757130
Centisome position: 39.52
GC content: 28.99
Gene sequence:
>1035_bases ATGGGGAAAGTTTTTTTTAATGAAAAAGAAATGATGAGAGGAATAAACATATGCCAAGATAATGGTACATTAAATGAAAA GAGTATAGGATGGAGTAGGAATCCTATATTTCATTGTAATCTTAAAGGAAATAAATTTAGAAAGAAAAAGTGGAATTATT GGTATATGATAAATGAAGATTGCTTATTTTCTGCTACTGTAGCAGATTTAGACTATATAGGAATGGCTTTTGTATATTTT TATGATTTTAATACAAGAGAATTTGCCGAAAAAACCGTTATTACACCTTTGGGGAAGGGATGTAGTATATCAGAAAAGGT TTTTGAAAATGTAGAGTTTTCTAATGACAAGCTACAGGTACTTTTTAAATGGAATAAATACTTAAAAAGTATGAGTATAC TAGTACATTGTAAAGATTTTAAGGGGAGAAATCTTACAGCGAAATTTTCTGTATTTTATCCTGAAGGTCATGAAACCTTA AATGTATTAATACCTTGGAATAAAAATAAATTTCAATTTACATCAAAGCAAAATTGTCTGCCTACAGAAGGAAGAATTAT GATAAATAATAAAACTTATACCTTTGATAAAAGTAATAGTTTTGCGGGATTAGATTTTGGAAGAGGGATATGGCCTTTTA AAATTATGTGGAACTGGGCTACTGCATCAGGAAATCAACAGGGAAGAATCATAGGATTTAATTTAGGAGCAAAATGGACG GATGGAACAGGTATTACAGAGAATGCATTATTAATAGATGGAAAAATTTTAAAGCTAAATGAATGCATATTATATGATTA TGATAAGAATAATCTTATGAAACCTTGGAGTATAAAAACAGAAATATCTGATAAGGTAAATCTTATTTTTAAACCTATAT ATGATAGAATGGCTCGGACGGATGTAGTGTTGTTAAAATCTACAGTTCATCAAATAATAGGAGAATTTTATGGAGAGATA AAAGACGAACAGGGGAATATTATTAATATAAAAGCTTTAAAAGGCTGTGCAGAAGAACATTATGCCAAATGGTAA
Upstream 100 bases:
>100_bases ATAGCTATAACTAGTTAAAAAAAGGTATGGGGGAGTTAAAATATAGAGTATTTACTAGGTCTAATAATATAAAAGCTTTG GTGGTGGGGAATTATTAAAA
Downstream 100 bases:
>100_bases AATATATAATAAACTTAAATAAGTCTATAAAGATATTGTAACTTTATAGGCTTATTTTTATTGATATGTTTATAATTAAT TAAGATACTTTATTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MGKVFFNEKEMMRGINICQDNGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWYMINEDCLFSATVADLDYIGMAFVYF YDFNTREFAEKTVITPLGKGCSISEKVFENVEFSNDKLQVLFKWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPEGHETL NVLIPWNKNKFQFTSKQNCLPTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIGFNLGAKWT DGTGITENALLIDGKILKLNECILYDYDKNNLMKPWSIKTEISDKVNLIFKPIYDRMARTDVVLLKSTVHQIIGEFYGEI KDEQGNIINIKALKGCAEEHYAKW
Sequences:
>Translated_344_residues MGKVFFNEKEMMRGINICQDNGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWYMINEDCLFSATVADLDYIGMAFVYF YDFNTREFAEKTVITPLGKGCSISEKVFENVEFSNDKLQVLFKWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPEGHETL NVLIPWNKNKFQFTSKQNCLPTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIGFNLGAKWT DGTGITENALLIDGKILKLNECILYDYDKNNLMKPWSIKTEISDKVNLIFKPIYDRMARTDVVLLKSTVHQIIGEFYGEI KDEQGNIINIKALKGCAEEHYAKW >Mature_343_residues GKVFFNEKEMMRGINICQDNGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWYMINEDCLFSATVADLDYIGMAFVYFY DFNTREFAEKTVITPLGKGCSISEKVFENVEFSNDKLQVLFKWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPEGHETLN VLIPWNKNKFQFTSKQNCLPTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIGFNLGAKWTD GTGITENALLIDGKILKLNECILYDYDKNNLMKPWSIKTEISDKVNLIFKPIYDRMARTDVVLLKSTVHQIIGEFYGEIK DEQGNIINIKALKGCAEEHYAKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39972; Mature: 39840
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVFFNEKEMMRGINICQDNGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWYMINED CCCEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCC CLFSATVADLDYIGMAFVYFYDFNTREFAEKTVITPLGKGCSISEKVFENVEFSNDKLQV CEEEEHHHHHHHHHEEEEEEEECCCHHHHHHEECCCCCCCCCHHHHHHHCCCCCCCEEEE LFKWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPEGHETLNVLIPWNKNKFQFTSKQNCL EEEHHHHHCEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCC PTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIGFNLGAKWT CCCCEEEECCEEEEEECCCCEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCEEC DGTGITENALLIDGKILKLNECILYDYDKNNLMKPWSIKTEISDKVNLIFKPIYDRMART CCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHH DVVLLKSTVHQIIGEFYGEIKDEQGNIINIKALKGCAEEHYAKW HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHCCCC >Mature Secondary Structure GKVFFNEKEMMRGINICQDNGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWYMINED CCEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEECCC CLFSATVADLDYIGMAFVYFYDFNTREFAEKTVITPLGKGCSISEKVFENVEFSNDKLQV CEEEEHHHHHHHHHEEEEEEEECCCHHHHHHEECCCCCCCCCHHHHHHHCCCCCCCEEEE LFKWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPEGHETLNVLIPWNKNKFQFTSKQNCL EEEHHHHHCEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCC PTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIGFNLGAKWT CCCCEEEECCEEEEEECCCCEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCEEC DGTGITENALLIDGKILKLNECILYDYDKNNLMKPWSIKTEISDKVNLIFKPIYDRMART CCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHH DVVLLKSTVHQIIGEFYGEIKDEQGNIINIKALKGCAEEHYAKW HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA