| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is adk
Identifier: 170755733
GI number: 170755733
Start: 3767380
End: 3768030
Strand: Reverse
Name: adk
Synonym: CLD_1045
Alternate gene names: 170755733
Gene position: 3768030-3767380 (Counterclockwise)
Preceding gene: 170754866
Following gene: 170757409
Centisome position: 95.19
GC content: 30.88
Gene sequence:
>651_bases ATGCGTATAATTTTGTTAGGTCCTCCAGGAGCAGGTAAAGGAACTCAAGCAAAATTAATAAGTGAAAAATTTTCTATTCC TCATATATCAACAGGTGATATATTTAGGGCAAACATAAAGGAGAAAACTCCTTTAGGAATAGAAGCAAAAAGATATATAG ATAATGGTCAATTAGTACCAGATGAGGTAACTATAGGAATAGTTAAAGATAGATTAACAAAAGATGATTGTGATAATGGT TTCCTTTTAGATGGTTTTCCAAGAACAGTTGCTCAAGCAGAAGCTTTAGATGAATTTCTAAAGGGTATAAATAAGGAGCT AGATGTAGCACTATTAATTAAAGTGCCTGAAGGATTTATCTTGGAAAGAATGACTGGTAGAAGAGTTTGCACATCTTGTG GTGCAAGTTATCACATAAGATTTAATCCTCCTAAAATAGAAGGAAAATGTGATATATGTGATAATGAATTAATTCAAAGA AAAGATGATACAGAAGCAACAGTAAAAGAAAGATTAGAAGTTTACAGCAAACAAACTTATCCGCTTATAAATTATTATAA AGACAATGGTATAATCTCAGAGGTTAATGGGACTGAATCAATTAATGAGGTATTTGGAAATATTTCGAATATCTTAGGGA GAGATAAATAA
Upstream 100 bases:
>100_bases TTGGATTTGCATTGGATACTATAAGACAAATAGAATCTCAATTAGTTATGCGTCACTATCAAGGTTTCTTAAAATAAAAA TGTTTTGGAGATGATTATGG
Downstream 100 bases:
>100_bases TGATAACAATAAAAACCGATTCTGAAATAGAATACATGGTAAAAGCAGGAAAAGTTGTTGCTGAAGCCTTAGACACTTTA GAAAAACATGTAAAGCCAGG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNG FLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQR KDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESINEVFGNISNILGRDK
Sequences:
>Translated_216_residues MRIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNG FLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQR KDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESINEVFGNISNILGRDK >Mature_216_residues MRIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNG FLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQR KDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESINEVFGNISNILGRDK
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=208, Percent_Identity=44.2307692307692, Blast_Score=191, Evalue=3e-49, Organism=Homo sapiens, GI4502013, Length=208, Percent_Identity=44.2307692307692, Blast_Score=191, Evalue=4e-49, Organism=Homo sapiens, GI19923437, Length=212, Percent_Identity=38.6792452830189, Blast_Score=160, Evalue=7e-40, Organism=Homo sapiens, GI310110345, Length=213, Percent_Identity=35.2112676056338, Blast_Score=147, Evalue=9e-36, Organism=Homo sapiens, GI53832003, Length=213, Percent_Identity=35.2112676056338, Blast_Score=147, Evalue=9e-36, Organism=Homo sapiens, GI8051579, Length=213, Percent_Identity=35.2112676056338, Blast_Score=147, Evalue=9e-36, Organism=Homo sapiens, GI53832001, Length=213, Percent_Identity=35.2112676056338, Blast_Score=147, Evalue=9e-36, Organism=Homo sapiens, GI4502011, Length=211, Percent_Identity=33.6492890995261, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI22749187, Length=213, Percent_Identity=27.6995305164319, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI7706497, Length=219, Percent_Identity=28.7671232876712, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI28144899, Length=210, Percent_Identity=29.0476190476191, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI28144897, Length=210, Percent_Identity=29.0476190476191, Blast_Score=88, Evalue=5e-18, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=51.3761467889908, Blast_Score=219, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17552384, Length=214, Percent_Identity=39.2523364485981, Blast_Score=180, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17537943, Length=217, Percent_Identity=30.4147465437788, Blast_Score=116, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17533833, Length=211, Percent_Identity=30.3317535545024, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17567503, Length=208, Percent_Identity=27.8846153846154, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17550688, Length=212, Percent_Identity=29.2452830188679, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147457, Length=216, Percent_Identity=23.6111111111111, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320432, Length=216, Percent_Identity=44.4444444444444, Blast_Score=203, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321018, Length=205, Percent_Identity=42.9268292682927, Blast_Score=157, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6322828, Length=213, Percent_Identity=27.2300469483568, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI22026816, Length=213, Percent_Identity=44.131455399061, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI17737899, Length=200, Percent_Identity=38, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI24645822, Length=200, Percent_Identity=38, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI221459597, Length=211, Percent_Identity=28.9099526066351, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356893, Length=211, Percent_Identity=28.9099526066351, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24663208, Length=204, Percent_Identity=25.4901960784314, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17647141, Length=204, Percent_Identity=25.4901960784314, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 24061; Mature: 24061
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVP CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHEECCCCCCCC DEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFI CCEEEEEHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH LERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTY HHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC PLINYYKDNGIISEVNGTESINEVFGNISNILGRDK CEEEEEECCCEEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVP CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHEECCCCCCCC DEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEGFI CCEEEEEHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH LERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTY HHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC PLINYYKDNGIISEVNGTESINEVFGNISNILGRDK CEEEEEECCCEEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA