| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755726
Identifier: 170755726
GI number: 170755726
Start: 2355007
End: 2357127
Strand: Reverse
Name: 170755726
Synonym: CLD_2407
Alternate gene names: NA
Gene position: 2357127-2355007 (Counterclockwise)
Preceding gene: 170755808
Following gene: 170756528
Centisome position: 59.55
GC content: 25.04
Gene sequence:
>2121_bases ATGAGAAACAACAGTCAAAATAAAGAAAGATATGCTAAAGCTCCATATAATTTTATACCTTTTCCTGAAAAAATATTTTA CAGACACACAATTTTACCAAAATATGAAGAAAAAGAAGGTAAAGGTATAACTATTTTGCCAAAACATAATGTGTTTAAAA AAGATTTAAAAACAGGATATATAGATTATTCAATAAATGTTGAAACACCGTTATTTATAAGTGATGGAGAAAAAGAAAGT GACTTTTTTAAGGTTAATGGTGAGTATACAATTCCAGGGAGTACTGTAAGAGGAAAAGTAAGAAGTAATGCTGAAGTTTT ATCCTGTTCTTACCCGGAATTTATAGAAAATAAAAAGTTGTGGTTTAGGGGATCTTTTTCAAAAGATGTACTTAAAGATA TGTATAAGGAAGATGTTTTACCTGAAAAAACTGGACAAATAAGTGATAATGTCAAAGCTGGATACTTAACTAGAAAAGGT GATAAATGGTTTATAACTCCTGCAAAACAAGTAAATAATAAATTTTTTAAAGAAATACATGAAAGTAAGTTGGAAAATCA AGATATAAATATGGATAAAGATATTAGGAATAATATTTTTATGTATGAATTTATAGATAAAAGAAGTAATAAAAGTCTTT GGAAGTTAATTGGAAATAACAAAAATGAAAAGAAAGAAATCAATAAAAGAATTAAAGAAAAGGGAAAAAAATTATCTAAA GAAGAAAAACAAGAACTGGAGAAAGAAATAGATAATTTGAAAAGCGATATAAAAAGATTATTAAAAAATAACGAAAGAAA AGCATTTAAACCATATTACTATAAAGCTTTATATCATTTAAAAGATAATAATGAAATTAAAATAACAAGAGTATCAGAAT CAATTAAAGATGAAAACTGCGGTATTTTAATGAACTCATCAAGATTAAATTGTAAACAAAACCATTACTTGATATTTGAA AAGGATACGGAAAAGTTAGCAAAAGAAATAAGCAAGGAATTAATAGCTCAGTATAAAACTAGTGTTCAGTATAGGCAAAA AAAAGCAGAAGTAGAGAATTTTGAAATAAGCAATAATGATAAGTTTCAAAATGAAAAAGAAAAGCCTATATTGTATATTA CAGATAAAAATGATGAGGAAAAAATAATAGCATTTGGATTTACTCCTTATTTAAAAATACCTTATAAAAAATCTGTGTTG GATGGGATAAAAACAAAAAAATATAATGTTGAAGAAACTAAAAAAGGAAAAATAGATTATGCTAAAGCTATATTTGGATT TACTAATTTTAATTATAAGGATTCAAAACAGGATAACAATTTAGAAATAACTAAATCTTATAAAGGAAGGGTTAGTTTTA CAAATGCAAAGCCAGTGCAAGAGTGTTATAAACAAGTAGAAAAGCCTGTTTATAAGCATCTTATGAATCCTAAAATTAGT TCTTTTCAGCTTTATTTAAAACAAGAAGTAAATAATCCTAAAAAGTTAAAAACATATAGTAGCGATGACTTTGAACTTAG AGGAAAAAAGTTTTATTGGCTTAGAAATAAACATGATGATGGAGATGATTATGAAAAAGATAAAAGAAAGGGTACACCTA ATAAAGACCAGTATGCAAGGTTATATGCTGTGGATAAAGGAGGAAAATTTAAAGGAAGAATTTATTTTGAAAATTTATAT AAAGATGAATTAGGTCTACTATTAATGTCTATAAAACCTTTTGAGGATGCAAAAGAAAACTTAGGACAAGGTAAACCCTA TGGATATGGGAAAGTTAACTTTCAGATTGAAGATATTGTAGAAATAGATTCGGATAAAAGATTTACTAGCTTAAATCCAT CTTTAAGTGAAAAATCAATACTTGAAGATAAAGATAAATGCATAAAAGACTTTATAGAATGTATGAAAAAACAAAATATA AACGTAGATTTTAAAAATGAAGTTATGTATAAATGTTTTGCTAAAAGTAAAATAGATGAAAAAGATATAAGAAGTCCTAA ATTTAATTATATGGGAATAAATGAATTTAGAAATAGAAATATACTTAAATCTATGGAATCGTATATAGATGATGAGAAAA TTTCTAAGAATGAAGTTGCAGTAACTAAAGAAGAAAGTTAG
Upstream 100 bases:
>100_bases AATGATAAATTAGTTATAAGAAATTATTTGGACTATGATAATGAAGGACAAGCATTTGTAGATTACACTAAGCTTTGTGG TATAGAAGGGGGAAAAGGCA
Downstream 100 bases:
>100_bases GTTGATTTAGATATTATAGAAAAAATGCTATCTAGTAAATATAAAACTGCAAGAAAAAATTAGAAGGTAATTAGTAGGTG GAAAAAATGAGAAATATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MRNNSQNKERYAKAPYNFIPFPEKIFYRHTILPKYEEKEGKGITILPKHNVFKKDLKTGYIDYSINVETPLFISDGEKES DFFKVNGEYTIPGSTVRGKVRSNAEVLSCSYPEFIENKKLWFRGSFSKDVLKDMYKEDVLPEKTGQISDNVKAGYLTRKG DKWFITPAKQVNNKFFKEIHESKLENQDINMDKDIRNNIFMYEFIDKRSNKSLWKLIGNNKNEKKEINKRIKEKGKKLSK EEKQELEKEIDNLKSDIKRLLKNNERKAFKPYYYKALYHLKDNNEIKITRVSESIKDENCGILMNSSRLNCKQNHYLIFE KDTEKLAKEISKELIAQYKTSVQYRQKKAEVENFEISNNDKFQNEKEKPILYITDKNDEEKIIAFGFTPYLKIPYKKSVL DGIKTKKYNVEETKKGKIDYAKAIFGFTNFNYKDSKQDNNLEITKSYKGRVSFTNAKPVQECYKQVEKPVYKHLMNPKIS SFQLYLKQEVNNPKKLKTYSSDDFELRGKKFYWLRNKHDDGDDYEKDKRKGTPNKDQYARLYAVDKGGKFKGRIYFENLY KDELGLLLMSIKPFEDAKENLGQGKPYGYGKVNFQIEDIVEIDSDKRFTSLNPSLSEKSILEDKDKCIKDFIECMKKQNI NVDFKNEVMYKCFAKSKIDEKDIRSPKFNYMGINEFRNRNILKSMESYIDDEKISKNEVAVTKEES
Sequences:
>Translated_706_residues MRNNSQNKERYAKAPYNFIPFPEKIFYRHTILPKYEEKEGKGITILPKHNVFKKDLKTGYIDYSINVETPLFISDGEKES DFFKVNGEYTIPGSTVRGKVRSNAEVLSCSYPEFIENKKLWFRGSFSKDVLKDMYKEDVLPEKTGQISDNVKAGYLTRKG DKWFITPAKQVNNKFFKEIHESKLENQDINMDKDIRNNIFMYEFIDKRSNKSLWKLIGNNKNEKKEINKRIKEKGKKLSK EEKQELEKEIDNLKSDIKRLLKNNERKAFKPYYYKALYHLKDNNEIKITRVSESIKDENCGILMNSSRLNCKQNHYLIFE KDTEKLAKEISKELIAQYKTSVQYRQKKAEVENFEISNNDKFQNEKEKPILYITDKNDEEKIIAFGFTPYLKIPYKKSVL DGIKTKKYNVEETKKGKIDYAKAIFGFTNFNYKDSKQDNNLEITKSYKGRVSFTNAKPVQECYKQVEKPVYKHLMNPKIS SFQLYLKQEVNNPKKLKTYSSDDFELRGKKFYWLRNKHDDGDDYEKDKRKGTPNKDQYARLYAVDKGGKFKGRIYFENLY KDELGLLLMSIKPFEDAKENLGQGKPYGYGKVNFQIEDIVEIDSDKRFTSLNPSLSEKSILEDKDKCIKDFIECMKKQNI NVDFKNEVMYKCFAKSKIDEKDIRSPKFNYMGINEFRNRNILKSMESYIDDEKISKNEVAVTKEES >Mature_706_residues MRNNSQNKERYAKAPYNFIPFPEKIFYRHTILPKYEEKEGKGITILPKHNVFKKDLKTGYIDYSINVETPLFISDGEKES DFFKVNGEYTIPGSTVRGKVRSNAEVLSCSYPEFIENKKLWFRGSFSKDVLKDMYKEDVLPEKTGQISDNVKAGYLTRKG DKWFITPAKQVNNKFFKEIHESKLENQDINMDKDIRNNIFMYEFIDKRSNKSLWKLIGNNKNEKKEINKRIKEKGKKLSK EEKQELEKEIDNLKSDIKRLLKNNERKAFKPYYYKALYHLKDNNEIKITRVSESIKDENCGILMNSSRLNCKQNHYLIFE KDTEKLAKEISKELIAQYKTSVQYRQKKAEVENFEISNNDKFQNEKEKPILYITDKNDEEKIIAFGFTPYLKIPYKKSVL DGIKTKKYNVEETKKGKIDYAKAIFGFTNFNYKDSKQDNNLEITKSYKGRVSFTNAKPVQECYKQVEKPVYKHLMNPKIS SFQLYLKQEVNNPKKLKTYSSDDFELRGKKFYWLRNKHDDGDDYEKDKRKGTPNKDQYARLYAVDKGGKFKGRIYFENLY KDELGLLLMSIKPFEDAKENLGQGKPYGYGKVNFQIEDIVEIDSDKRFTSLNPSLSEKSILEDKDKCIKDFIECMKKQNI NVDFKNEVMYKCFAKSKIDEKDIRSPKFNYMGINEFRNRNILKSMESYIDDEKISKNEVAVTKEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83436; Mature: 83436
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNNSQNKERYAKAPYNFIPFPEKIFYRHTILPKYEEKEGKGITILPKHNVFKKDLKTGY CCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCE IDYSINVETPLFISDGEKESDFFKVNGEYTIPGSTVRGKVRSNAEVLSCSYPEFIENKKL EEEEEECCCCEEEECCCCCCCEEEECCEEECCCCCEECHHCCCCEEEECCCHHHHCCCCE WFRGSFSKDVLKDMYKEDVLPEKTGQISDNVKAGYLTRKGDKWFITPAKQVNNKFFKEIH EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHH ESKLENQDINMDKDIRNNIFMYEFIDKRSNKSLWKLIGNNKNEKKEINKRIKEKGKKLSK HHHCCCCCCCCCCHHHCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCH EEKQELEKEIDNLKSDIKRLLKNNERKAFKPYYYKALYHLKDNNEIKITRVSESIKDENC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHCCCCCC GILMNSSRLNCKQNHYLIFEKDTEKLAKEISKELIAQYKTSVQYRQKKAEVENFEISNND CEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC KFQNEKEKPILYITDKNDEEKIIAFGFTPYLKIPYKKSVLDGIKTKKYNVEETKKGKIDY CCCCCCCCCEEEEECCCCCCEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHH AKAIFGFTNFNYKDSKQDNNLEITKSYKGRVSFTNAKPVQECYKQVEKPVYKHLMNPKIS HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCH SFQLYLKQEVNNPKKLKTYSSDDFELRGKKFYWLRNKHDDGDDYEKDKRKGTPNKDQYAR HHHHHHHHHCCCCHHEECCCCCCCEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEE LYAVDKGGKFKGRIYFENLYKDELGLLLMSIKPFEDAKENLGQGKPYGYGKVNFQIEDIV EEEECCCCCEEEEEEEHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCCEEEEEEEEEE EIDSDKRFTSLNPSLSEKSILEDKDKCIKDFIECMKKQNINVDFKNEVMYKCFAKSKIDE ECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH KDIRSPKFNYMGINEFRNRNILKSMESYIDDEKISKNEVAVTKEES HHCCCCCCCEECHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRNNSQNKERYAKAPYNFIPFPEKIFYRHTILPKYEEKEGKGITILPKHNVFKKDLKTGY CCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCE IDYSINVETPLFISDGEKESDFFKVNGEYTIPGSTVRGKVRSNAEVLSCSYPEFIENKKL EEEEEECCCCEEEECCCCCCCEEEECCEEECCCCCEECHHCCCCEEEECCCHHHHCCCCE WFRGSFSKDVLKDMYKEDVLPEKTGQISDNVKAGYLTRKGDKWFITPAKQVNNKFFKEIH EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHH ESKLENQDINMDKDIRNNIFMYEFIDKRSNKSLWKLIGNNKNEKKEINKRIKEKGKKLSK HHHCCCCCCCCCCHHHCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCH EEKQELEKEIDNLKSDIKRLLKNNERKAFKPYYYKALYHLKDNNEIKITRVSESIKDENC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHCCCCCC GILMNSSRLNCKQNHYLIFEKDTEKLAKEISKELIAQYKTSVQYRQKKAEVENFEISNND CEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC KFQNEKEKPILYITDKNDEEKIIAFGFTPYLKIPYKKSVLDGIKTKKYNVEETKKGKIDY CCCCCCCCCEEEEECCCCCCEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHH AKAIFGFTNFNYKDSKQDNNLEITKSYKGRVSFTNAKPVQECYKQVEKPVYKHLMNPKIS HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCH SFQLYLKQEVNNPKKLKTYSSDDFELRGKKFYWLRNKHDDGDDYEKDKRKGTPNKDQYAR HHHHHHHHHCCCCHHEECCCCCCCEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEE LYAVDKGGKFKGRIYFENLYKDELGLLLMSIKPFEDAKENLGQGKPYGYGKVNFQIEDIV EEEECCCCCEEEEEEEHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCCEEEEEEEEEE EIDSDKRFTSLNPSLSEKSILEDKDKCIKDFIECMKKQNINVDFKNEVMYKCFAKSKIDE ECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH KDIRSPKFNYMGINEFRNRNILKSMESYIDDEKISKNEVAVTKEES HHCCCCCCCEECHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA