| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756528
Identifier: 170756528
GI number: 170756528
Start: 2354000
End: 2354920
Strand: Reverse
Name: 170756528
Synonym: CLD_2408
Alternate gene names: NA
Gene position: 2354920-2354000 (Counterclockwise)
Preceding gene: 170755726
Following gene: 170757727
Centisome position: 59.49
GC content: 22.26
Gene sequence:
>921_bases ATGAGAAATATGTGTAAGAAACTAATTTTAATATCAGTGTTTTTCAATATATTTTGTATTTTGATTTCTGGAATAAATAA TCAAGCAGTTTATGCTGCTCCTAATTCTATCAATGAAACAATGTCAAAAGAAGAAATAATGAATAAATACTATGAATTAA AAAAGGACAATCAAGAATTAATAGAAGAATATAATAAGTTAAGTCATGAATGGTCAGATGAAAAAATAGAAATAGAAAAA AAGAAAGAAAATGTTGATAGTAGTATAGTTAAAATTGTGACATTTGGAAGTTTATTTTTAATACTTTCTTCAATGGGGAT ATTTGTATACGTAAAAAAACATATGCAAAATAAAATTAAAGAATTATATGAAAATAAAATTAACCATATTGTTGAAAATG AAATAAATAAAAAATTACCAAAAGAAGTATCAAAACAAGTTTCAAAGAAAACAGGAGAAGAAATTGAATATATAGAAAAA ACAGCAAAAGAGTGCAAAAGAGAACAAACATTAATGAAAGAAAAAAATATACTTGTCATATCTAACGATAATGAAGAAGA AAAATTATTAAAAGACTCAAATTTATTAAATCAATTTGAAAAAGCTGAAATGGTTGTACTAGGTAATGAGATTGATAATT TAGGTGAATATGACGTAATACTTTTTAATGATATTAATGGCTATCTTGAAGATGGTGAAATGAATAAAATAATAGATGAT AATATTGATAACAAGAAGAATGCCGTTTATTTTTATTTTACAAGAAATTATAAGAGAACTTTTAAAAGTAATAAGCCTAA TAATACTAATTTTGCTAAATCAAATTCTACTTTTGTAGGTAATTTAATTGATTTGATGAAGTATCAAGATGATGTTTTAA AAAACAAAAAGTATAATAATGAATGTGTAGGTTGTACTTAA
Upstream 100 bases:
>100_bases AAGAAGAAAGTTAGGTTGATTTAGATATTATAGAAAAAATGCTATCTAGTAAATATAAAACTGCAAGAAAAAATTAGAAG GTAATTAGTAGGTGGAAAAA
Downstream 100 bases:
>100_bases GGTATAGTTATGGAAACTTTATTAAAACATGAAGGAGAGAAGTTTTTTCAAAAGATAGGACAGGCTTTTACTTATGAAGT GAAAGGGAATTATATAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRNMCKKLILISVFFNIFCILISGINNQAVYAAPNSINETMSKEEIMNKYYELKKDNQELIEEYNKLSHEWSDEKIEIEK KKENVDSSIVKIVTFGSLFLILSSMGIFVYVKKHMQNKIKELYENKINHIVENEINKKLPKEVSKQVSKKTGEEIEYIEK TAKECKREQTLMKEKNILVISNDNEEEKLLKDSNLLNQFEKAEMVVLGNEIDNLGEYDVILFNDINGYLEDGEMNKIIDD NIDNKKNAVYFYFTRNYKRTFKSNKPNNTNFAKSNSTFVGNLIDLMKYQDDVLKNKKYNNECVGCT
Sequences:
>Translated_306_residues MRNMCKKLILISVFFNIFCILISGINNQAVYAAPNSINETMSKEEIMNKYYELKKDNQELIEEYNKLSHEWSDEKIEIEK KKENVDSSIVKIVTFGSLFLILSSMGIFVYVKKHMQNKIKELYENKINHIVENEINKKLPKEVSKQVSKKTGEEIEYIEK TAKECKREQTLMKEKNILVISNDNEEEKLLKDSNLLNQFEKAEMVVLGNEIDNLGEYDVILFNDINGYLEDGEMNKIIDD NIDNKKNAVYFYFTRNYKRTFKSNKPNNTNFAKSNSTFVGNLIDLMKYQDDVLKNKKYNNECVGCT >Mature_306_residues MRNMCKKLILISVFFNIFCILISGINNQAVYAAPNSINETMSKEEIMNKYYELKKDNQELIEEYNKLSHEWSDEKIEIEK KKENVDSSIVKIVTFGSLFLILSSMGIFVYVKKHMQNKIKELYENKINHIVENEINKKLPKEVSKQVSKKTGEEIEYIEK TAKECKREQTLMKEKNILVISNDNEEEKLLKDSNLLNQFEKAEMVVLGNEIDNLGEYDVILFNDINGYLEDGEMNKIIDD NIDNKKNAVYFYFTRNYKRTFKSNKPNNTNFAKSNSTFVGNLIDLMKYQDDVLKNKKYNNECVGCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35832; Mature: 35832
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMCKKLILISVFFNIFCILISGINNQAVYAAPNSINETMSKEEIMNKYYELKKDNQEL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHH IEEYNKLSHEWSDEKIEIEKKKENVDSSIVKIVTFGSLFLILSSMGIFVYVKKHMQNKIK HHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELYENKINHIVENEINKKLPKEVSKQVSKKTGEEIEYIEKTAKECKREQTLMKEKNILVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE SNDNEEEKLLKDSNLLNQFEKAEMVVLGNEIDNLGEYDVILFNDINGYLEDGEMNKIIDD ECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCC NIDNKKNAVYFYFTRNYKRTFKSNKPNNTNFAKSNSTFVGNLIDLMKYQDDVLKNKKYNN CCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC ECVGCT CCCCCC >Mature Secondary Structure MRNMCKKLILISVFFNIFCILISGINNQAVYAAPNSINETMSKEEIMNKYYELKKDNQEL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHH IEEYNKLSHEWSDEKIEIEKKKENVDSSIVKIVTFGSLFLILSSMGIFVYVKKHMQNKIK HHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELYENKINHIVENEINKKLPKEVSKQVSKKTGEEIEYIEKTAKECKREQTLMKEKNILVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE SNDNEEEKLLKDSNLLNQFEKAEMVVLGNEIDNLGEYDVILFNDINGYLEDGEMNKIIDD ECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCC NIDNKKNAVYFYFTRNYKRTFKSNKPNNTNFAKSNSTFVGNLIDLMKYQDDVLKNKKYNN CCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC ECVGCT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA