| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755704
Identifier: 170755704
GI number: 170755704
Start: 241471
End: 242115
Strand: Direct
Name: 170755704
Synonym: CLD_0574
Alternate gene names: NA
Gene position: 241471-242115 (Clockwise)
Preceding gene: 170756282
Following gene: 170754882
Centisome position: 6.1
GC content: 16.74
Gene sequence:
>645_bases ATGATAAATTTATTTATTTATATATCAGCCATACTGCTTATGTTTATTATATGTATGCAAGGTGGAAAAGCAACCTTTAA GGCACCTCGTAAAATAAAAATTATATCTATAATAATATATTTTTTAATGATTTTAAAGTTCATATCTTTAACTTTATTAG TTTTTGTTAATAATATTAGAAATTTATATTGGTTAAAGTGGATATATTTTTTAGATTTTTTAGCTATACCTATATGTATA TTAATATGTTTTTACATATGTATAAGAAATAATAAATTTAACTTAAATTATATAATTTTTATAATAGTATTAATAACTTC TATTTTAATATTTTTTATGACTAAATATAGTTTAAAAATAAATATGTTTAACGGTCAATACTATATAATGGAATTATTAA CACCAATTAACATGTACGTGTTTTTTATATTCGTTAATTTAATATTTTTAATATTATGCCTTATAAAACATAATAACAAG TATATAAATAAAAATATATTATATTTAATGTTTTTTAGTACAATAGTAAATATATCAGATATTATACTAAGTTTTTTAAA TATTAATATATTACCACCAAATATATTAGGGAATATTATTTGGATATATACTTTATATACAGCCGTGAATAAATTGATAA GATAA
Upstream 100 bases:
>100_bases TTGGATATTTTGGGCATATTAGATTAATGTAGGAATATTTTAATTTTAATCTTAATAAATATAAGTAGTAGCATTGTTAA ATTGGAGAGTTTATTTAATT
Downstream 100 bases:
>100_bases ACAGAGTTCTTGGGTTCAGAGGGAGCTTTTACTCCGTCTGAAGCTTATTAACAGAATTCTTAGGAGTTTTACTCTTTAGA AGTCGTTATCCTTTAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNIRNLYWLKWIYFLDFLAIPICI LICFYICIRNNKFNLNYIIFIIVLITSILIFFMTKYSLKINMFNGQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNK YINKNILYLMFFSTIVNISDIILSFLNINILPPNILGNIIWIYTLYTAVNKLIR
Sequences:
>Translated_214_residues MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNIRNLYWLKWIYFLDFLAIPICI LICFYICIRNNKFNLNYIIFIIVLITSILIFFMTKYSLKINMFNGQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNK YINKNILYLMFFSTIVNISDIILSFLNINILPPNILGNIIWIYTLYTAVNKLIR >Mature_214_residues MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNIRNLYWLKWIYFLDFLAIPICI LICFYICIRNNKFNLNYIIFIIVLITSILIFFMTKYSLKINMFNGQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNK YINKNILYLMFFSTIVNISDIILSFLNINILPPNILGNIIWIYTLYTAVNKLIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25524; Mature: 25524
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYWLKWIYFLDFLAIPICILICFYICIRNNKFNLNYIIFIIVLITSILIFFMTKYSLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NMFNGQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNKYINKNILYLMFFSTIVNISD EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IILSFLNINILPPNILGNIIWIYTLYTAVNKLIR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYWLKWIYFLDFLAIPICILICFYICIRNNKFNLNYIIFIIVLITSILIFFMTKYSLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NMFNGQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNKYINKNILYLMFFSTIVNISD EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IILSFLNINILPPNILGNIIWIYTLYTAVNKLIR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA