| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754882
Identifier: 170754882
GI number: 170754882
Start: 244914
End: 246179
Strand: Direct
Name: 170754882
Synonym: CLD_0572
Alternate gene names: NA
Gene position: 244914-246179 (Clockwise)
Preceding gene: 170755704
Following gene: 170755801
Centisome position: 6.19
GC content: 27.25
Gene sequence:
>1266_bases ATGAAGAAGCTACAAAGTTTTTTCTTAAGTAAAATTATTAATAAAAAAGTTTATGATGAGTATGGTGATTATATAGGTAA ACTAATTGATATTTATGTGACTTCTGAGGATGATTATCCAAGAGCCATAGCCTATAAGATAAAAAAGGGAAGAGAAGTAG TAAATTATGAGTTTAAAAACATTTCTTTTTATGATGATGAAGGCAAATCCATTATAAAAGTAATAGGAACTAGAGATATA ATATTAAGAAAATATTCCTATTTATTGTCACAACATCTTTTAAACAAACAAATAATTGATATAAATGGTAAAAAGATGGT TAAAGTACATGACTTAAGAATTGGAGAAATCGCAGGAGAGTATAAAGTAATAGCTGTAGATACAGGTGCGCTAGCATTAA GTAGAAGAGTAGGAATGGAAAATTTATTAAGAAGTATTTATAAAATATTTAATAAAAAAATAGAGGATACTTTAATAATG TGGGATAGTGTGGAATCCTTAGAAATGGTAAATAATAATTTGAAATTATCTGTGTCTTATCAAAAACTCTCAACATTACA TCCAGCAGATTTAGCAGATATTATAGAAGATATGAATGATAGTTATAGAAAATTAGTTTTTGAAAGTTTAGATGATGATT TAGCTGCGGATACTTTTGAAGAGATAGACTTAGAAGTAAAAACAGAAATGTTAGAAGAAATGACATCCTCCAAAAAAGCC GAAATCATATATAATATGTCAAAAGATGAGGCTGCAGATATATTGGCACAAATGAAAGAGGAAGAAGTAGAGCAAATTCT TTCTATTATGGAGGAAAGAGATGCTAGGGATATAAGAAAACTTATGGATTATAAAGAAGAAACTGCAGGAAGCATAATGA ATAAAGATTTTATATCTTTTAATGTGAACATAACTGCAGAAGAAACTATAGATTTATTAAGAGAAATAAAACCTAAAGAT GAAGAGGCTTATTATATATACATTGTAGATGAAAAAGAACAGTTAAAAGGGGCTATATCTCTTACAGATTTAATAATATG TACTCCAGAAGCTAAATTAAGAGATATAATGGATAAAGATATAGTAAAAGTTAAAGATACAGACCATATAAATGAAGCTG TAGAATTAGCAATAAAATATGATTTATTATCTATTCCTGTAATTGAGGGAGAAAATAAATTATGTGGAACTATATCTATA GATGATATTATAGAGGATGTATTTGCACCTATGTGGAGAAAGAAAGTTAAAATAGTTGCGGTTTAA
Upstream 100 bases:
>100_bases AGCAAAATTATATTATTTTGTAGGGGAATATTTATTTAAGCAAAAGATACTTATTTGTAGCTTAGGATATTCCTTTACAG ATGTGAAAGGAGGAATATTT
Downstream 100 bases:
>100_bases ATTATATTTATTATAAAACATGGTACCCTAAAATAGATCTAATTTTAATATAACAAATATAAAAAACACATGTAATAAAC TTATGGATAAGTTTATTACA
Product: PRC-barrel domain/MgtE domain/CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAYKIKKGREVVNYEFKNISFYDDEGKSIIKVIGTRDI ILRKYSYLLSQHLLNKQIIDINGKKMVKVHDLRIGEIAGEYKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIM WDSVESLEMVNNNLKLSVSYQKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEIDLEVKTEMLEEMTSSKKA EIIYNMSKDEAADILAQMKEEEVEQILSIMEERDARDIRKLMDYKEETAGSIMNKDFISFNVNITAEETIDLLREIKPKD EEAYYIYIVDEKEQLKGAISLTDLIICTPEAKLRDIMDKDIVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTISI DDIIEDVFAPMWRKKVKIVAV
Sequences:
>Translated_421_residues MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAYKIKKGREVVNYEFKNISFYDDEGKSIIKVIGTRDI ILRKYSYLLSQHLLNKQIIDINGKKMVKVHDLRIGEIAGEYKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIM WDSVESLEMVNNNLKLSVSYQKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEIDLEVKTEMLEEMTSSKKA EIIYNMSKDEAADILAQMKEEEVEQILSIMEERDARDIRKLMDYKEETAGSIMNKDFISFNVNITAEETIDLLREIKPKD EEAYYIYIVDEKEQLKGAISLTDLIICTPEAKLRDIMDKDIVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTISI DDIIEDVFAPMWRKKVKIVAV >Mature_421_residues MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAYKIKKGREVVNYEFKNISFYDDEGKSIIKVIGTRDI ILRKYSYLLSQHLLNKQIIDINGKKMVKVHDLRIGEIAGEYKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIM WDSVESLEMVNNNLKLSVSYQKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEIDLEVKTEMLEEMTSSKKA EIIYNMSKDEAADILAQMKEEEVEQILSIMEERDARDIRKLMDYKEETAGSIMNKDFISFNVNITAEETIDLLREIKPKD EEAYYIYIVDEKEQLKGAISLTDLIICTPEAKLRDIMDKDIVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTISI DDIIEDVFAPMWRKKVKIVAV
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 48594; Mature: 48594
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAYKIKKGREVVNYEFKN CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECC ISFYDDEGKSIIKVIGTRDIILRKYSYLLSQHLLNKQIIDINGKKMVKVHDLRIGEIAGE EEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECEEEECCCCC YKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIMWDSVESLEMVNNNLKLSVSY EEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCEEEEEEH QKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEIDLEVKTEMLEEMTSSKKA HHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE EIIYNMSKDEAADILAQMKEEEVEQILSIMEERDARDIRKLMDYKEETAGSIMNKDFISF EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEE NVNITAEETIDLLREIKPKDEEAYYIYIVDEKEQLKGAISLTDLIICTPEAKLRDIMDKD EEEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCEEEEEEEEECCCHHHHHHHHHC IVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTISIDDIIEDVFAPMWRKKVKIVA CEEECCCHHHHHHHHHHHEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCEEEEE V C >Mature Secondary Structure MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAYKIKKGREVVNYEFKN CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECC ISFYDDEGKSIIKVIGTRDIILRKYSYLLSQHLLNKQIIDINGKKMVKVHDLRIGEIAGE EEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECEEEECCCCC YKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIMWDSVESLEMVNNNLKLSVSY EEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCEEEEEEH QKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEIDLEVKTEMLEEMTSSKKA HHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE EIIYNMSKDEAADILAQMKEEEVEQILSIMEERDARDIRKLMDYKEETAGSIMNKDFISF EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEE NVNITAEETIDLLREIKPKDEEAYYIYIVDEKEQLKGAISLTDLIICTPEAKLRDIMDKD EEEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCEEEEEEEEECCCHHHHHHHHHC IVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTISIDDIIEDVFAPMWRKKVKIVA CEEECCCHHHHHHHHHHHEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCEEEEE V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA