| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755656
Identifier: 170755656
GI number: 170755656
Start: 560196
End: 560912
Strand: Direct
Name: 170755656
Synonym: CLD_0302
Alternate gene names: NA
Gene position: 560196-560912 (Clockwise)
Preceding gene: 170757296
Following gene: 170757513
Centisome position: 14.15
GC content: 32.64
Gene sequence:
>717_bases ATGTTTAAACAATTAACTAAAAGGGTTTATTATCTAGAACACAATGAAGATACAGACAGACCTGTTTTGGGATATATTAA GGGAGATAAATTTTCTCTAATGATAGATGGAGGTAATTCAGCTAAACATGTGGCAATTTATATGCAGGAGCTAGAGGAGA GACAATTGCCACATCCAAAGTTTGTTGCTATTACACATTGGCATTGGGATCACACCTTTGGTATTTCAGCTACAAATGCT GCCATTATTGCAAATTCATTAACGAATAAGCAGCTATGTAAGATGAGAGGGTGGAAATGGGATGAAGAATCTATGGACAA GCGAGTAGCCGCTGGTGAGGAAATTGAATTTTGTAATAGCATGATTAAGAAAGAATATCCCGAAAAAGATAAAATTAAGG TTATTAGTGCAGATATGATATTTAATGATTATTTTATGCTTGATTTAGGTGGAATTACCTGCGAGATGATAAAAATAGGT GGATGTCATAGTGATGATTCAACAATTTTTTATGTACCAGAAGAAAAGATATTATTTATCGGAGATGCTGCATGTGAAGA TTTGTACCATGGAGAAAGTTATGATAAAGGCAAGCTAAAAAAGGTTATTAGCATTTTATCAGAAATTGAATTTAATATTG TTATAGAAGGGCATAATGAACATACAGACAAAGCTGAGTTATTAGAGTATTTAGAAGGAAAGCTTACAGAAATTTAA
Upstream 100 bases:
>100_bases AACCCTGATTTTAATTATTGAGGGGAATAGGTAATTTTTGTAAATGTAAAACAATCATATTGCAATAAGAAATAGTAGAG ATAAAAAATGGGGTGAATAT
Downstream 100 bases:
>100_bases AATAGAGTAGAATGAAAGGCTTGATATATAGAACATACTTCAAAGATTTATTCGGCTTATGAAGAAACGATATTTAATGA AACTCCATTTTTTTACATCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MFKQLTKRVYYLEHNEDTDRPVLGYIKGDKFSLMIDGGNSAKHVAIYMQELEERQLPHPKFVAITHWHWDHTFGISATNA AIIANSLTNKQLCKMRGWKWDEESMDKRVAAGEEIEFCNSMIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIG GCHSDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKLKKVISILSEIEFNIVIEGHNEHTDKAELLEYLEGKLTEI
Sequences:
>Translated_238_residues MFKQLTKRVYYLEHNEDTDRPVLGYIKGDKFSLMIDGGNSAKHVAIYMQELEERQLPHPKFVAITHWHWDHTFGISATNA AIIANSLTNKQLCKMRGWKWDEESMDKRVAAGEEIEFCNSMIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIG GCHSDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKLKKVISILSEIEFNIVIEGHNEHTDKAELLEYLEGKLTEI >Mature_238_residues MFKQLTKRVYYLEHNEDTDRPVLGYIKGDKFSLMIDGGNSAKHVAIYMQELEERQLPHPKFVAITHWHWDHTFGISATNA AIIANSLTNKQLCKMRGWKWDEESMDKRVAAGEEIEFCNSMIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIG GCHSDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKLKKVISILSEIEFNIVIEGHNEHTDKAELLEYLEGKLTEI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27411; Mature: 27411
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQLTKRVYYLEHNEDTDRPVLGYIKGDKFSLMIDGGNSAKHVAIYMQELEERQLPHPK CCHHHHCEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCEEHHHHHHHHHHCCCCCC FVAITHWHWDHTFGISATNAAIIANSLTNKQLCKMRGWKWDEESMDKRVAAGEEIEFCNS EEEEEEEECCEEECCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH MIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFI HHHHHCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEE GDAACEDLYHGESYDKGKLKKVISILSEIEFNIVIEGHNEHTDKAELLEYLEGKLTEI ECHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFKQLTKRVYYLEHNEDTDRPVLGYIKGDKFSLMIDGGNSAKHVAIYMQELEERQLPHPK CCHHHHCEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCEEHHHHHHHHHHCCCCCC FVAITHWHWDHTFGISATNAAIIANSLTNKQLCKMRGWKWDEESMDKRVAAGEEIEFCNS EEEEEEEECCEEECCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH MIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFI HHHHHCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEE GDAACEDLYHGESYDKGKLKKVISILSEIEFNIVIEGHNEHTDKAELLEYLEGKLTEI ECHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA