| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755649
Identifier: 170755649
GI number: 170755649
Start: 3480489
End: 3480707
Strand: Reverse
Name: 170755649
Synonym: CLD_1328
Alternate gene names: NA
Gene position: 3480707-3480489 (Counterclockwise)
Preceding gene: 170756897
Following gene: 170756239
Centisome position: 87.94
GC content: 29.22
Gene sequence:
>219_bases ATGCCAATAGTTATAGGTAAAGAAAAAGATGATGATGATAGGCTCTATGTAACTTTTAATTATACTCATGATAGGGTAGA AAGAATAAAGAGAATAGAGGGGCACAAATGGAATGCTATAAAGAAACATTGGAGTATTCCTAATAACAGGGAAGCAATTG ATAAAATAGTTTTAACTTTTTATGATGAAGAAGTGATGTTAGATGCATCTTTAATATAA
Upstream 100 bases:
>100_bases GAAAAATCCTTAAAGTGGTCTAATTATATAATTGATAAATTAAATAAATTTATATAAAATATTATTAATAAAATAATAAA TAGGATTAGGGGAGAAGAAG
Downstream 100 bases:
>100_bases AAATTTTTAAAATAACTTAGGATGATATATTATTCTAAGTTATTTTTTTATACAAAAATAATTATCTAACAAATAATTTA TTGTGATTTTTATATTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPIVIGKEKDDDDRLYVTFNYTHDRVERIKRIEGHKWNAIKKHWSIPNNREAIDKIVLTFYDEEVMLDASLI
Sequences:
>Translated_72_residues MPIVIGKEKDDDDRLYVTFNYTHDRVERIKRIEGHKWNAIKKHWSIPNNREAIDKIVLTFYDEEVMLDASLI >Mature_71_residues PIVIGKEKDDDDRLYVTFNYTHDRVERIKRIEGHKWNAIKKHWSIPNNREAIDKIVLTFYDEEVMLDASLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8644; Mature: 8513
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVIGKEKDDDDRLYVTFNYTHDRVERIKRIEGHKWNAIKKHWSIPNNREAIDKIVLTF CCEECCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHEE YDEEVMLDASLI CCCCEEEEEECC >Mature Secondary Structure PIVIGKEKDDDDRLYVTFNYTHDRVERIKRIEGHKWNAIKKHWSIPNNREAIDKIVLTF CEECCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHEE YDEEVMLDASLI CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA