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The map label for this gene is yvrC [H]

Identifier: 170755631

GI number: 170755631

Start: 1486993

End: 1487907

Strand: Direct

Name: yvrC [H]

Synonym: CLD_3216

Alternate gene names: 170755631

Gene position: 1486993-1487907 (Clockwise)

Preceding gene: 170754797

Following gene: 170755506

Centisome position: 37.57

GC content: 30.71

Gene sequence:

>915_bases
ATGAAAGGTTTAAAAAGAAGAGTATCGATTATTATTTGTATTATGTTAGCTTTTATGCTAGTATCGTGCAATTTAAAGAA
GGGAGAAAATAAAGAAACACAAAAAAATATAAAAATTACAGATTCCTATGGAAAAGAGTTAGCTTTTGAAAAAGCTCCAG
AAAGAATAGTTAGTCTTTCACCTGGAGCAACGGAAACCATATATGCCTTAAATAAAAAAAATACATTAGTTGGAAGATCT
GATTTTGATGACTATCCAACAGCAGTTAGCAAAATAAAATCAGTTGGTGGAGTAAAAGATCCAAGTATAGAAAAAATAAC
TGAACTAAAGCCAGATTTAGTTATAGGTGGAGCTCATTTTTCAAAAGATACTGTGAAAAAACTTGAAGACTTGGGCATTA
AAGTAGCAGTGCTTTATGGTGCAGAGGATCTAGATGGAGCTTATAAAAATATAATGGATATTTCTACTATATTAGGAGTA
ACTGAAAAAGGCCAAACTATAGTTGATGGTATGAAAAAGAAGGTTGAAAGTGTTGAGAATAAGGTGAAGTCATTAAATAA
ACCTAAGGTTTACTATATGGTTGATTTTGGAAAAGCAGACTTTTCTGCTGGAGGAGATACTTTTATAGGTAAAATGATTG
AAAAAGCAGGTGGAGATAATATTGCTAAGGATACAAAGGGATGGAATTATTCTTTTGAAAAAATAGTTGAAAATAAGCCG
GAAATGATAATATTATCAGATAAATTTAATACTAAAAAGAATTTTTTAACTGCTGATAAGTATAAGGAGCTTCCCGCATC
AAAGGCTAATAAAGTATATGAAATTGATGATAACATGTTATTAAGACAAGGCCCAAGGCAAGCCGATGGATTAGAAGCAT
TAGCAAAAATTATTCATCCTGAAGCATTCAAATAA

Upstream 100 bases:

>100_bases
AGGTTATTGGAGCCTAAGAATACTTAAATATAAAAAATTAGGTATTAAAGCATATTACATAAGAGATTAAACAATATATA
GAAAAGAAGGGATGTAAATC

Downstream 100 bases:

>100_bases
TCAATAATGAGGGGACATTAAATGAAAAAAAAGAGTTTATTCATTGGGTTAATAATAATTACTATAGTGGCTTCTTTAGT
TTCCATAACTATTGGAGCTG

Product: iron chelate ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGKELAFEKAPERIVSLSPGATETIYALNKKNTLVGRS
DFDDYPTAVSKIKSVGGVKDPSIEKITELKPDLVIGGAHFSKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGV
TEKGQTIVDGMKKKVESVENKVKSLNKPKVYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIAKDTKGWNYSFEKIVENKP
EMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLLRQGPRQADGLEALAKIIHPEAFK

Sequences:

>Translated_304_residues
MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGKELAFEKAPERIVSLSPGATETIYALNKKNTLVGRS
DFDDYPTAVSKIKSVGGVKDPSIEKITELKPDLVIGGAHFSKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGV
TEKGQTIVDGMKKKVESVENKVKSLNKPKVYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIAKDTKGWNYSFEKIVENKP
EMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLLRQGPRQADGLEALAKIIHPEAFK
>Mature_304_residues
MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGKELAFEKAPERIVSLSPGATETIYALNKKNTLVGRS
DFDDYPTAVSKIKSVGGVKDPSIEKITELKPDLVIGGAHFSKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGV
TEKGQTIVDGMKKKVESVENKVKSLNKPKVYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIAKDTKGWNYSFEKIVENKP
EMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLLRQGPRQADGLEALAKIIHPEAFK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=214, Percent_Identity=30.3738317757009, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33646; Mature: 33646

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGKELAFEKAPERIVSLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCCHHHHHHHCCHHHEECC
PGATETIYALNKKNTLVGRSDFDDYPTAVSKIKSVGGVKDPSIEKITELKPDLVIGGAHF
CCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCC
SKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGVTEKGQTIVDGMKKKVESVEN
CHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KVKSLNKPKVYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIAKDTKGWNYSFEKIVENKP
HHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
EMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLLRQGPRQADGLEALAKIIHP
CEEEEECCCCCCHHCCCHHHHHHCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHHHHHCC
EAFK
CCCC
>Mature Secondary Structure
MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGKELAFEKAPERIVSLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCCHHHHHHHCCHHHEECC
PGATETIYALNKKNTLVGRSDFDDYPTAVSKIKSVGGVKDPSIEKITELKPDLVIGGAHF
CCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCC
SKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGVTEKGQTIVDGMKKKVESVEN
CHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KVKSLNKPKVYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIAKDTKGWNYSFEKIVENKP
HHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
EMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLLRQGPRQADGLEALAKIIHP
CEEEEECCCCCCHHCCCHHHHHHCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHHHHHCC
EAFK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]