Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is ywoG [H]

Identifier: 170754797

GI number: 170754797

Start: 1485491

End: 1486690

Strand: Direct

Name: ywoG [H]

Synonym: CLD_3217

Alternate gene names: 170754797

Gene position: 1485491-1486690 (Clockwise)

Preceding gene: 170755137

Following gene: 170755631

Centisome position: 37.53

GC content: 28.58

Gene sequence:

>1200_bases
ATGGAGACTAAAGAAAAACTATGGAGCAAATATTTTATATTAGCATTAATTATTACAGTAGGAGTAAATTTAACTTGTAA
TTTATTATTATCTACCATATCTATATATGCTAAGAAAATTACTGGGGTAGATAGTTATGCAGGTATAATGACAGGAGCCT
TTACATTGGCTGCTTTATTTATAAGAGTATTTGCAGGAAAGTTATTAGACAAACTTGGAAGAAAAAAAATATTGATATTA
GGGGTAGTTATTACTGCATTTTCAACTATAGGATATATTTTTAGTAATGGGATAATATTACTTGTAATATTTAGAGTAAT
GCAAGGCTTTGGTTTTGGTATTTCATCTACAGCCATAGCTACTATTGTTACTGATGTTACGCCACCGGCAAGAATGCTTG
AGGGAATAGGATATTCAGGTGTTGGTATAACAATTACTACAGCCATAGGACCATCTATGGCACTTCACATAGTTGGAAGG
GGATACAATGAGTTTAATTTATTATTTATTACAACTTTTGCAGTATCTATAATTACTATACTAGTAGCACTTTTTTTATC
CTATGAGAAAAATATTAATATACAATGTGAAAAATTTAAGATTATAAAAAGTGATACAGATTCTAATAGGATTAGTAAAG
AAATATTACTACCAGCTTTAATTCTATTTTTAGCAGCAGTTGCAGAAAGTACTATATTATCCTTCACAGCATTATATGGC
ATAGAACTAGGATTTGATAATATAGGTTTATTTTTTACAATAAACGCACTAGGAATATTAGCATCAAGATTATTCATAAA
TCAAATAGTGGATAAGCTTGGAATGAATACAGTATTGTCTATCGGACTTATAATATTCGCCTTTTCTATATTTGGAATAG
CCATGGTAAAAACTATGTATATGTTATTAGTATTGGGATTTTTATGTGGTATTATGATGGGATCATTATTACCTATAATA
AATGTAATGATTTTAAATACTGTAAGCCAAGATAAAAAAGGTGTAGCAAATGCTATTTACTATGCATTATTGGATGGTGG
TTATGGAATAGGATCAATATTGTGGGGAAGGATTATTATAAACTATGGATATAGAGCTATATATGCCTTAGCAGGTATTG
TATTAGTAGTAGCTTTCGTAATATTTGCATTAAATTTATTTTATAGAGGATCTACAATATTAAAAAGGCATTATGAATAA

Upstream 100 bases:

>100_bases
AATGAAATTTTATAAATCAATTGTAGCCTAAACTACAATCTATTTTCAAGGTTAAGGGTAAAATTTAATTTGCAGAATTT
TTATGGGAGGCAAAAATATT

Downstream 100 bases:

>100_bases
AAAGGATGTTATAAAGCTATGGGATGTTTATTTTTCCTATAGCTTTTTTATAAAGTAATGTAAATATATATATAAATCAG
GATAAAAAATAAGAATAAAT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL
GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR
GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG
IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII
NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE

Sequences:

>Translated_399_residues
METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL
GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR
GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG
IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII
NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE
>Mature_399_residues
METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL
GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR
GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG
IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII
NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=389, Percent_Identity=24.4215938303342, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43455; Mature: 43455

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH
TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI
HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH
LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG
HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH
TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI
HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH
LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG
HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]