| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755611
Identifier: 170755611
GI number: 170755611
Start: 1247198
End: 1247977
Strand: Direct
Name: 170755611
Synonym: CLD_3439
Alternate gene names: NA
Gene position: 1247198-1247977 (Clockwise)
Preceding gene: 170757581
Following gene: 170756403
Centisome position: 31.51
GC content: 21.67
Gene sequence:
>780_bases ATGGAAAAAGATTTTGCAATAGCTTTTATAGGAAATAATATTTTTTATCATCTAGGAGTAATTAAAGCTGTAGATGAATA TAATATGTATAATAGATTTAAGGCAGTATCAGGAACTGGGTTAGGATCATTAAGTGCTATAATGTTTGGAAAAAAAGATT GTAATTCATTTAAAAATCTATGTATTTTAATGAGTGATATAAAAAGAATACATATTGAAGAAGATGAGATTTATAAGATT TTAAATATGCATACTATAAATAAGAGTTTAAATGAAAAAATATATATGTGGAGCAGAAAGATTTCTAAAGAAGGCATGAT AAACTGGAGTGATATGTTAAAAATTATAAATAATAAATATATAAGTGTAGGAAAGAATAATTTTAAAATGGATTGTTATT TAGGGTGCTATGAGTTGCCTTTTATGAGAAAATCAGTTTTTAAATTAAACAATTATGATAGTAATTATATAGAGAAAGTT ATATTAAATTCGGTAGCAAAGCCTAGTATATTTAATAATAGAGTTAAGAGTAAATCTCTTATTACAGGAGATATAAATTG TGAATTACCTATAGAAATATTAAAAGATAATAATTATAAAAACATAATAATAATTGATTCAGATAATATTAAAATAGAAT ATAGATATGAAGAGGTAGAAAAATTTAATAGGAAAAGTTTAGAGAATGAGATTAAATATGATGAATCGGAAAAATATATA CAAAAAGCATATGAGGACACAATAAATATTATAAAAAACAATTTAAAAAATATAGCTTAA
Upstream 100 bases:
>100_bases ATTTTTATTTTTATATTTGAAGATTTGTGGTAATATATATGTATAGATTATTTATTTAAAGGTTTACAACAGAGGATAGT ATAAATTTGAGGTGAATTAT
Downstream 100 bases:
>100_bases ATAAAAATTTTATTAGATTTAAGAAGAGTTGCTAATGATTATTAAAGTATCTTTAGCAACTTTTTAATTTTTACATATTG TTAACCAAAATATAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI QKAYEDTINIIKNNLKNIA
Sequences:
>Translated_259_residues MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI QKAYEDTINIIKNNLKNIA >Mature_259_residues MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI QKAYEDTINIIKNNLKNIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30406; Mature: 30406
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNL CCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH CILMSDIKRIHIEEDEIYKILNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKY HHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCHHHHHHHHCCCE ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKVILNSVAKPSIFNNRVKSKSL EEECCCCEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEE ITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH QKAYEDTINIIKNNLKNIA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNL CCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH CILMSDIKRIHIEEDEIYKILNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKY HHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCHHHHHHHHCCCE ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKVILNSVAKPSIFNNRVKSKSL EEECCCCEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEE ITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH QKAYEDTINIIKNNLKNIA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA