Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755611

Identifier: 170755611

GI number: 170755611

Start: 1247198

End: 1247977

Strand: Direct

Name: 170755611

Synonym: CLD_3439

Alternate gene names: NA

Gene position: 1247198-1247977 (Clockwise)

Preceding gene: 170757581

Following gene: 170756403

Centisome position: 31.51

GC content: 21.67

Gene sequence:

>780_bases
ATGGAAAAAGATTTTGCAATAGCTTTTATAGGAAATAATATTTTTTATCATCTAGGAGTAATTAAAGCTGTAGATGAATA
TAATATGTATAATAGATTTAAGGCAGTATCAGGAACTGGGTTAGGATCATTAAGTGCTATAATGTTTGGAAAAAAAGATT
GTAATTCATTTAAAAATCTATGTATTTTAATGAGTGATATAAAAAGAATACATATTGAAGAAGATGAGATTTATAAGATT
TTAAATATGCATACTATAAATAAGAGTTTAAATGAAAAAATATATATGTGGAGCAGAAAGATTTCTAAAGAAGGCATGAT
AAACTGGAGTGATATGTTAAAAATTATAAATAATAAATATATAAGTGTAGGAAAGAATAATTTTAAAATGGATTGTTATT
TAGGGTGCTATGAGTTGCCTTTTATGAGAAAATCAGTTTTTAAATTAAACAATTATGATAGTAATTATATAGAGAAAGTT
ATATTAAATTCGGTAGCAAAGCCTAGTATATTTAATAATAGAGTTAAGAGTAAATCTCTTATTACAGGAGATATAAATTG
TGAATTACCTATAGAAATATTAAAAGATAATAATTATAAAAACATAATAATAATTGATTCAGATAATATTAAAATAGAAT
ATAGATATGAAGAGGTAGAAAAATTTAATAGGAAAAGTTTAGAGAATGAGATTAAATATGATGAATCGGAAAAATATATA
CAAAAAGCATATGAGGACACAATAAATATTATAAAAAACAATTTAAAAAATATAGCTTAA

Upstream 100 bases:

>100_bases
ATTTTTATTTTTATATTTGAAGATTTGTGGTAATATATATGTATAGATTATTTATTTAAAGGTTTACAACAGAGGATAGT
ATAAATTTGAGGTGAATTAT

Downstream 100 bases:

>100_bases
ATAAAAATTTTATTAGATTTAAGAAGAGTTGCTAATGATTATTAAAGTATCTTTAGCAACTTTTTAATTTTTACATATTG
TTAACCAAAATATAAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI
LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV
ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI
QKAYEDTINIIKNNLKNIA

Sequences:

>Translated_259_residues
MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI
LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV
ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI
QKAYEDTINIIKNNLKNIA
>Mature_259_residues
MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNLCILMSDIKRIHIEEDEIYKI
LNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKV
ILNSVAKPSIFNNRVKSKSLITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI
QKAYEDTINIIKNNLKNIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30406; Mature: 30406

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNL
CCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
CILMSDIKRIHIEEDEIYKILNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKY
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCHHHHHHHHCCCE
ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKVILNSVAKPSIFNNRVKSKSL
EEECCCCEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEE
ITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI
EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH
QKAYEDTINIIKNNLKNIA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNRFKAVSGTGLGSLSAIMFGKKDCNSFKNL
CCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
CILMSDIKRIHIEEDEIYKILNMHTINKSLNEKIYMWSRKISKEGMINWSDMLKIINNKY
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCHHHHHHHHCCCE
ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKVILNSVAKPSIFNNRVKSKSL
EEECCCCEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCEE
ITGDINCELPIEILKDNNYKNIIIIDSDNIKIEYRYEEVEKFNRKSLENEIKYDESEKYI
EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH
QKAYEDTINIIKNNLKNIA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA