| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755586
Identifier: 170755586
GI number: 170755586
Start: 1408796
End: 1409503
Strand: Direct
Name: 170755586
Synonym: CLD_3288
Alternate gene names: NA
Gene position: 1408796-1409503 (Clockwise)
Preceding gene: 170754782
Following gene: 170757672
Centisome position: 35.59
GC content: 22.74
Gene sequence:
>708_bases ATGGAAGTTAAATATATGGAGATATTTGAGGATGAGCTCAATAAGTTAACTTATTGTACAGAGGTGACAACCGCTAAATC ATTAAATAAATTTACAGACAAAATAAAAGTATTTTATCATAAATATATAACAGGAGAAAGTTATTTTGATTTTTATTTTG GGAGAACATATAAAGGCAAATTAATAGAAAATAAATTTTATATGTTTAAAGAAGATTTAAGATTATATATTCATTTTCTG AAAAACTTTTATAATGTTTTAAGAATAACCGTTAATAAACAATCAGATATTATACATTATTTTTTTATTAAAGATCAAGG AGAAATATGTATATCTTTAATAGGAGAGGATTATGTGAAGTTGGCCTCAGAAGATAATAGTAAAGCTAGAGTATTTTTTT TATTAAATAAAGATGAACTATCCTATTATATAACAGTTATGGAAAATATATATTATGAGAGAAATGTAATTAATGGACTA GATTACTTAAAGAATTCTTTAGATGAGGCTAATGGAAAAGGCTATAATAAAGAAAATAATAAAAATTTAGAAAAGGAAGT AAATAGAGATTATGTATTAAGCCAAAGAGAAAAAAACAATGTATATCTACAAGCATTATATGCTTTGGTGGATGAAGCTT TAGATAGAAAAGATAAAAAGACCTTTTATGCTATATGTGATCAAATGAAAAAATATAATAAAAAATAA
Upstream 100 bases:
>100_bases GTATAAAGAATATAGGTAATAAAACTTATTGGAAATGGAATGAAAAACATTAATAATTATCGTAAATTTATATAAAAATG GGGAGAGGTATAAGAGTATC
Downstream 100 bases:
>100_bases ACTATATAAAATTTAAAACCCCTTGATAGCAAAATTAAATACAAGACAAGGGGCTTTATTTTAAATTTTATTAAGCATTA CATTGGTCATATTCATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MEVKYMEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYHKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFL KNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGL DYLKNSLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYAICDQMKKYNKK
Sequences:
>Translated_235_residues MEVKYMEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYHKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFL KNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGL DYLKNSLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYAICDQMKKYNKK >Mature_235_residues MEVKYMEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYHKYITGESYFDFYFGRTYKGKLIENKFYMFKEDLRLYIHFL KNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGL DYLKNSLDEANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYAICDQMKKYNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28320; Mature: 28320
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKYMEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYHKYITGESYFDFYFGRTYKGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC LIENKFYMFKEDLRLYIHFLKNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVK EECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCEEEEEHHHHHHH LASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKNSLDEANGKGYNKENN HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC KNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYAICDQMKKYNKK CCHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVKYMEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYHKYITGESYFDFYFGRTYKGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC LIENKFYMFKEDLRLYIHFLKNFYNVLRITVNKQSDIIHYFFIKDQGEICISLIGEDYVK EECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCEEEEEHHHHHHH LASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKNSLDEANGKGYNKENN HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC KNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYAICDQMKKYNKK CCHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA