| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170754782
Identifier: 170754782
GI number: 170754782
Start: 1408362
End: 1408748
Strand: Direct
Name: 170754782
Synonym: CLD_3289
Alternate gene names: NA
Gene position: 1408362-1408748 (Clockwise)
Preceding gene: 170757745
Following gene: 170755586
Centisome position: 35.58
GC content: 26.61
Gene sequence:
>387_bases TTGTTAGTAGTTTTTATATATTTTATAATTATTATGCCAGTCCACGAAATACTACACAGTTTGGCTTTCCCAAATTTTAA ACAAACCATTTTCGGATTTATACCTAAGGGGTTAGTATCTTACTCCTTCTTTAAGGGGAAAATATCAAGGAAGAGGCTAA TAATATTTCTAATTTTTCCTTTTATAATATTAACTATATTGCCAACCATAGGATTAAGCTTTATAAGGATTAAAAATAAC TTTGTATATGTGATAATAATAATAAATGCAGTTGCTTCCTATGTGGATATTTTGACTATATTTGTGTTATTGCTACAGGT TCCTAAAAGTACTTGTATAAAGAATATAGGTAATAAAACTTATTGGAAATGGAATGAAAAACATTAA
Upstream 100 bases:
>100_bases TTGATTTATTATATACACACACAGGAAAAGGCTGCCTTAAAATATAAACAGGCAGTCTTTTTATATATTTAAAAAATATA ATAGTTAAGTAGAATTTGTT
Downstream 100 bases:
>100_bases TAATTATCGTAAATTTATATAAAAATGGGGAGAGGTATAAGAGTATCATGGAAGTTAAATATATGGAGATATTTGAGGAT GAGCTCAATAAGTTAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLVVFIYFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFKGKISRKRLIIFLIFPFIILTILPTIGLSFIRIKNN FVYVIIIINAVASYVDILTIFVLLLQVPKSTCIKNIGNKTYWKWNEKH
Sequences:
>Translated_128_residues MLVVFIYFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFKGKISRKRLIIFLIFPFIILTILPTIGLSFIRIKNN FVYVIIIINAVASYVDILTIFVLLLQVPKSTCIKNIGNKTYWKWNEKH >Mature_128_residues MLVVFIYFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFKGKISRKRLIIFLIFPFIILTILPTIGLSFIRIKNN FVYVIIIINAVASYVDILTIFVLLLQVPKSTCIKNIGNKTYWKWNEKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14940; Mature: 14940
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVFIYFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFKGKISRKRLIIFLIFP CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FIILTILPTIGLSFIRIKNNFVYVIIIINAVASYVDILTIFVLLLQVPKSTCIKNIGNKT HHHHHHHHHHCHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC YWKWNEKH CEECCCCC >Mature Secondary Structure MLVVFIYFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFKGKISRKRLIIFLIFP CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FIILTILPTIGLSFIRIKNNFVYVIIIINAVASYVDILTIFVLLLQVPKSTCIKNIGNKT HHHHHHHHHHCHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC YWKWNEKH CEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA