| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755472
Identifier: 170755472
GI number: 170755472
Start: 2676746
End: 2677666
Strand: Reverse
Name: 170755472
Synonym: CLD_2076
Alternate gene names: NA
Gene position: 2677666-2676746 (Counterclockwise)
Preceding gene: 170755082
Following gene: 170756300
Centisome position: 67.65
GC content: 27.36
Gene sequence:
>921_bases ATGGCTAGCGTGACAAGATGGGTAGATAAAGAGTCAACATCATTAAAAAATGCTATAGATAATATAATCACAATATCAGA AAGAGAGAATGATTCGGAGGGGACAACACGATATTGTAATTGGGAATCTGAAAAAACATTTGATCAAATTCAAATAACAC AATTCAATAATAGAGAAATAGAATATAATTATTTTTCAGTATCATTTGATAGTGTAAGGCCAGGGCTAGAGCCCGTAGAA GATAGAACAACACATAATAAGTGCTTTGTTATAGTTTATTTTAATGGCTTTTCTGTAAACTATATAATAGATAGGAATTC GGATGCGAAAACTATTTTAAGAAAATTACTTAACTATTCTGGGAAAAATGAAATTGTGGAAAATAATTACCAAGTAGATA GTGACTTCTTTATTTGGTTAATTAGTAAAGTATATTATGATCAAAATACAATAGAGATTAATAGTCAAACAGATGTTAAA CTTGTATTAAAATCTATTAGGGGATTTAAAGGAGATTCTCAAGATTATTTAACAAAAGTTTCAGCTTCTGGAGAGTCTGT AATGAAAATAATTAGCACACTTTCTTTTCTACTAGAAAGTCGAAATATTAATCAGATAAGGATTAATATAGATTATGGAA ACAATCGAGGAATCGTAATAGAATTAAATATTAATAATTCTATTAGAATTAACACAGATATATATATAGGAGACTACATA ATGGAAGTTCAAGAGAAAAAGATATCTCAGTTGTATCTGTTGTTTTATTTAGAATTATTCCCTAATCTTATACAGTCATA TCAGAATGAAAAAGAGTGTGAGTTGTGGAATAGGGAGAAAAATATCAACTTTTTAAAAGATGTTGCTGAAGCTTTAACGG AAAGTATAAATATTAAATTGAATACATTGACAAATAAATAA
Upstream 100 bases:
>100_bases ATTAATGATAACATAAAATATAAGATGTACCCTAAAGAATATAGTACGAATAGTTTTAAGCTTGTAAGTGAAAATATATG ATTGTGGGTGATGGGGAAAA
Downstream 100 bases:
>100_bases TTTATTATAAGAATAAAAATAATTTAGAAAATTTAAAAATAATTTATCTAATAGAAAAGAACTTGTTTAATACAGGTTCT TTTCTATTAGAATTTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MASVTRWVDKESTSLKNAIDNIITISERENDSEGTTRYCNWESEKTFDQIQITQFNNREIEYNYFSVSFDSVRPGLEPVE DRTTHNKCFVIVYFNGFSVNYIIDRNSDAKTILRKLLNYSGKNEIVENNYQVDSDFFIWLISKVYYDQNTIEINSQTDVK LVLKSIRGFKGDSQDYLTKVSASGESVMKIISTLSFLLESRNINQIRINIDYGNNRGIVIELNINNSIRINTDIYIGDYI MEVQEKKISQLYLLFYLELFPNLIQSYQNEKECELWNREKNINFLKDVAEALTESINIKLNTLTNK
Sequences:
>Translated_306_residues MASVTRWVDKESTSLKNAIDNIITISERENDSEGTTRYCNWESEKTFDQIQITQFNNREIEYNYFSVSFDSVRPGLEPVE DRTTHNKCFVIVYFNGFSVNYIIDRNSDAKTILRKLLNYSGKNEIVENNYQVDSDFFIWLISKVYYDQNTIEINSQTDVK LVLKSIRGFKGDSQDYLTKVSASGESVMKIISTLSFLLESRNINQIRINIDYGNNRGIVIELNINNSIRINTDIYIGDYI MEVQEKKISQLYLLFYLELFPNLIQSYQNEKECELWNREKNINFLKDVAEALTESINIKLNTLTNK >Mature_305_residues ASVTRWVDKESTSLKNAIDNIITISERENDSEGTTRYCNWESEKTFDQIQITQFNNREIEYNYFSVSFDSVRPGLEPVED RTTHNKCFVIVYFNGFSVNYIIDRNSDAKTILRKLLNYSGKNEIVENNYQVDSDFFIWLISKVYYDQNTIEINSQTDVKL VLKSIRGFKGDSQDYLTKVSASGESVMKIISTLSFLLESRNINQIRINIDYGNNRGIVIELNINNSIRINTDIYIGDYIM EVQEKKISQLYLLFYLELFPNLIQSYQNEKECELWNREKNINFLKDVAEALTESINIKLNTLTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35775; Mature: 35643
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVTRWVDKESTSLKNAIDNIITISERENDSEGTTRYCNWESEKTFDQIQITQFNNREI CCCHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCEE EYNYFSVSFDSVRPGLEPVEDRTTHNKCFVIVYFNGFSVNYIIDRNSDAKTILRKLLNYS EEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCC GKNEIVENNYQVDSDFFIWLISKVYYDQNTIEINSQTDVKLVLKSIRGFKGDSQDYLTKV CCCCEECCCEEECCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHEE SASGESVMKIISTLSFLLESRNINQIRINIDYGNNRGIVIELNINNSIRINTDIYIGDYI CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEEEEEECHHH MEVQEKKISQLYLLFYLELFPNLIQSYQNEKECELWNREKNINFLKDVAEALTESINIKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHCEEEE NTLTNK EEECCC >Mature Secondary Structure ASVTRWVDKESTSLKNAIDNIITISERENDSEGTTRYCNWESEKTFDQIQITQFNNREI CCHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCEE EYNYFSVSFDSVRPGLEPVEDRTTHNKCFVIVYFNGFSVNYIIDRNSDAKTILRKLLNYS EEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHCCC GKNEIVENNYQVDSDFFIWLISKVYYDQNTIEINSQTDVKLVLKSIRGFKGDSQDYLTKV CCCCEECCCEEECCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHEE SASGESVMKIISTLSFLLESRNINQIRINIDYGNNRGIVIELNINNSIRINTDIYIGDYI CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEEEEEECHHH MEVQEKKISQLYLLFYLELFPNLIQSYQNEKECELWNREKNINFLKDVAEALTESINIKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHCEEEE NTLTNK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA