| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756300
Identifier: 170756300
GI number: 170756300
Start: 2675890
End: 2676474
Strand: Reverse
Name: 170756300
Synonym: CLD_2077
Alternate gene names: NA
Gene position: 2676474-2675890 (Counterclockwise)
Preceding gene: 170755472
Following gene: 170754798
Centisome position: 67.62
GC content: 23.93
Gene sequence:
>585_bases TTGAATATAGATAAAATAAAAAAATTAGAAGATTTAAATAAAGAATTATCAAAACTTCAACAGCAGAGAAATAGAAATTT CGAAAAAGCCAAAGTTAATTTTTTTGAAAATAATATTCAAAAGTTTAAGGACTTTTTTATAAAACAAGGATTTGCTGTTA CAGAAAGCAGCAAAGTAGACAGAGAGGGGTATAATAATAAAGTTATAAGTGCAATATATAATAATTTTAAAATTGATGTT GCTATTCCACCTATAGACATTTCATATATGGGTGCATATTCAGTATGGGAGTTAAATGTATATAAAGATGATGTAAAATA TTCTCTTATGGTTAATGAACTAGGGCATAAGCCATCTATTAGAACTAGTTTTACTTCATCTATAAATAAAACATTAACAG AAGATGAAAAAATGGAAAATGAAATAATAGAAACAAAAGAAACAATAACTATGCTAAAGGAAGAATTAGAATCAAATGAA AAAACAGATTTTGGATTTACTTTAGTAAAGGAAGAAAAAGAAAGAAAATTTTGTGATACACAGTTTAAGTCAATGAATGA TTTATTGAAAACTTTATTTAATTAA
Upstream 100 bases:
>100_bases ACTTGGAATACAGTAGATATTAAAAATAATGGGAAAATATAAAATAAAATACAATTTTATGTTATAATTTAGATAGAATA ATATAAAGGAGGTATTGAAA
Downstream 100 bases:
>100_bases CATATTTCAACTTAAAAAAGAACCTACTTATTAAATGTGGGTTCTTTTTTTATTATAATTTTGGAGGTGTAATGTGGAAT TAAAAGTCTGCGAGGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN
Sequences:
>Translated_194_residues MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN >Mature_194_residues MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVDREGYNNKVISAIYNNFKIDV AIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSIRTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNE KTDFGFTLVKEEKERKFCDTQFKSMNDLLKTLFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22850; Mature: 22850
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVD CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC REGYNNKVISAIYNNFKIDVAIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSI CCCCCCHHHHHHHCCEEEEEEECCCCEEECCCEEEEEEEEECCCHHHHHHHHHHCCCCCC RTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNEKTDFGFTLVKEEKERKFCDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHH QFKSMNDLLKTLFN HHHHHHHHHHHHCC >Mature Secondary Structure MNIDKIKKLEDLNKELSKLQQQRNRNFEKAKVNFFENNIQKFKDFFIKQGFAVTESSKVD CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC REGYNNKVISAIYNNFKIDVAIPPIDISYMGAYSVWELNVYKDDVKYSLMVNELGHKPSI CCCCCCHHHHHHHCCEEEEEEECCCCEEECCCEEEEEEEEECCCHHHHHHHHHHCCCCCC RTSFTSSINKTLTEDEKMENEIIETKETITMLKEELESNEKTDFGFTLVKEEKERKFCDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHH QFKSMNDLLKTLFN HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA